Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01101 ATGATCGCGCTTTTCATAGACCCTTTTTATTTTTACTTGCCCCATGTTGGTGGCCCAGGTTGCTTGACGACCGACATCGAATTGAAAGGGTGGGTCACAGTTTTGAGGAGCATTGCTGATCTTTTCCATTGGCTTCACATTGCCACGAAATTCAGGACTGCCTTTGTTGCTCCCAGCTCTAAGGTCTTTGGCCGTGGCATGTCATTCTCCTCTACATTGATTACTCTACGCCCTGATGTATTTGTATGCACACGCTACTTCTCCTCTGGTTTTCCACCTGATAATGTGGTTCAGGAAAACCATTTGAATTTTGTTTGTAAAACGGTTGGCTATTGGATTGTGATCTGGTTGGTGTTTCCAGCAAACAAAGATCAGACAGCTGACCATGACAACAACACCATTGCTTTGCTTGTTCTTTTCCAATATATTCCTAGACTATTTCTTATCTACCCCCTGAATCAGCAGCTTGTGAAAAACGGTGGACTTGTCGCTAGAACTCCCTGGACAGGGGCTGCATATAATCTTGTTTCTTACTTAATTGCCAGTCATGTTGTTGGTGCCTCTTGGTATCTGTACGCAATAGGGCGGCAATTTGCCTGCTGGAATTCAGAGTGTGGAAAGGATAATCAGGGTCCTTTCCCTTGCCAACCTGTATATCTAAACTGTGCTTTTATGAACAAACCTGAAAGGCAGAGTTGGTTAAATGTCACTCAAGTCATTGCCAATTGTGATGCAAAGAAAGAGGACGAGATCAAATTCAAGTTTGGGTTGTTCGCTGCTGCTTTCAAGGACGATGTTGCTTCTTCAACCTTTATGAAGAAATACTTGTATTGTCTTTGGTGGGGTTTGAGAGGGCTGAGGTATGGCATTCTAGCTTTTCAATATTCTATGCAATTTTGCTTACAATTATTTAGTGAGCTGTTTAATATCCTAGCTAAGGTGATAATATTCTTTTCTTCTGGCCCATTTATGTTTGGTGACGCTCTTTCATTTTTCACGCAAATGTCGATTTGTCTGCGCAGTTCTTATTTACAGGAAATGGAAACAAGTACATACATAGGGGAGAACTTATTTTGCTTATTTGCTGCCATTATGGGACTGGCCCTTACTGCACTTCTGATTGGAAATATGCAGGTATTCATCAATTTCTTTCTTGCCGCGTTGAAGAATTATTTGCAATCAATGTCAGCAAGACTCGAAGAATGGAGGCTTAAGAAGAGAGACACTGAGGAATGGATGAGACGTCGCCAGTTACCTCCAGCCTTGCAGGAACGTGTCATCAAGTTTATTTCATACCAATGGCTTGCCACAAAGGGGGTTGATGAAGAGTCCATATTGCAATCATTGCCTTCAGATCTTCGTCGCGAAATTCAACGGCATTTTTGTCTTTCTCTTGTCCGCCGTGATGACTATGGTGAGGGATATTCAGGGTACAACAACATAAATAACAGCCAGCATCTTGGAACCATAAGTTCGGCCTCCAAGTTTGCGGCAAGCAGGAAGAGAGGGGTTAATCAGAAAATGCAAGTCTGCTCGCCTGTACCTCAGTTAGTCAGGCCTGTTGAGTCTGACTACACTTGA 1581 0.4282 MIALFIDPFYFYLPHVGGPGCLTTDIELKGWVTVLRSIADLFHWLHIATKFRTAFVAPSSKVFGRGMSFSSTLITLRPDVFVCTRYFSSGFPPDNVVQENHLNFVCKTVGYWIVIWLVFPANKDQTADHDNNTIALLVLFQYIPRLFLIYPLNQQLVKNGGLVARTPWTGAAYNLVSYLIASHVVGASWYLYAIGRQFACWNSECGKDNQGPFPCQPVYLNCAFMNKPERQSWLNVTQVIANCDAKKEDEIKFKFGLFAAAFKDDVASSTFMKKYLYCLWWGLRGLRYGILAFQYSMQFCLQLFSELFNILAKVIIFFSSGPFMFGDALSFFTQMSICLRSSYLQEMETSTYIGENLFCLFAAIMGLALTALLIGNMQVFINFFLAALKNYLQSMSARLEEWRLKKRDTEEWMRRRQLPPALQERVIKFISYQWLATKGVDEESILQSLPSDLRREIQRHFCLSLVRRDDYGEGYSGYNNINNSQHLGTISSASKFAASRKRGVNQKMQVCSPVPQLVRPVESDYT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01101 526 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 468 - -
Pte18g01101 526 SUPERFAMILY Voltage-gated potassium channels 3 381 - -
Pte18g01101 526 Gene3D Helix hairpin bin 393 462 - -
Pte18g01101 526 SUPERFAMILY cAMP-binding domain-like 400 468 IPR018490 -
Pte18g01101 526 Coils Coil 385 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01101 Pte-Chr18 23436201 23440483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01101 1 468 Ion Channels AT5G14870 49.362 8.49e-145 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01101 K05391 - qsa:O6P43_008993 452.981