Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01098 ATGTATATAGGATATGCTGCGTTAGGCTTGATTTTCATCTCATTCATACTTTTCAAGATCTCTACAAGAAGTAAGAGAAGAGGGAAGAAGAAGACTGATGTGGAAAACAAGGAAGCCTCTGTAGAAGATGGGACGAAAGGGTCTAGTGTTGTATCAACTGAACGTAGAATAAGTATGAGCAAGTCAGAAATTTCAGTCACTTCAGAAAGCGGGATTGTTTCAACCTCACTAGTAGTCCTCACTACTCCTTCCATGCCAGCATTTAAATTTGAGGATTTACTTGGTGCCCCTGCCGAAATGCTAGGAAGAGGAAAATATGGCAGCCTTTACAAAGTCGTGCTTGAAAGTGGTACGCCATTTGTTGTAAAAAGAATAAAGGATTTGCCATGTTCAAGCAGTGAATTCAAGAATAGAATGCAGGCTTTGAGTCAAGTAAGACATCCAAATCTGCTGCCAGCTCTTGCTTACTATTGCTCTAAAGAGGAGAAGCTTCTGGTTTATGAATATCAAAAGAATGGAAGTTTATTCAAGCTTCTCCATGGCAACGCAAAACCCTTTGATTGGGTCAGCAGACTCACCGTTGCAGCTACCATCTCTGAGGCATTGTGCTTCATGCATCAGGAGCTTCAAGAAGAGGGAATTGCGCATGGCAACTTGAAGTCATCTAATATCTTGCTAAACAATAACATGGAACCATGCATGAGCGAGTATGGTGTCATGATTAAATCGGAAGATCATCAGAAAAGTTTTCCATTCCCTAGTTCTAACGAAGCAGCTGCATCAAATTCCTTTAAAGCAGATATTTATCATTTCGGTGTGATTCTCCTTGAGCTACTTACTGGCAAGTTGGTTCAAAACGATGGTATAGATCTGACAGACTGGGTTCGTTCTGTTGTCCAAGAAGAATGGACTGTGGAGGTGTTCGACAGATCACTTATATCGGAGGGTGCAAGTGAAGAAAGGATGGTTAACCTTCTTCGGGTAGCAATCAAATGTGTGAGCAAATCACCTCCAAGCATGAACCACATTGCTACCATTATCAATACACTCAAAGAAGAAGAAGAAAGGTCAATGCTGTATGAAGTCTGA 1089 0.4114 MYIGYAALGLIFISFILFKISTRSKRRGKKKTDVENKEASVEDGTKGSSVVSTERRISMSKSEISVTSESGIVSTSLVVLTTPSMPAFKFEDLLGAPAEMLGRGKYGSLYKVVLESGTPFVVKRIKDLPCSSSEFKNRMQALSQVRHPNLLPALAYYCSKEEKLLVYEYQKNGSLFKLLHGNAKPFDWVSRLTVAATISEALCFMHQELQEEGIAHGNLKSSNILLNNNMEPCMSEYGVMIKSEDHQKSFPFPSSNEAAASNSFKADIYHFGVILLELLTGKLVQNDGIDLTDWVRSVVQEEWTVEVFDRSLISEGASEERMVNLLRVAIKCVSKSPPSMNHIATIINTLKEEEERSMLYEV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01098 362 SUPERFAMILY Protein kinase-like (PK-like) 99 339 IPR011009 -
Pte18g01098 362 Gene3D Transferase(Phosphotransferase) domain 1 171 361 - -
Pte18g01098 362 ProSiteProfiles Protein kinase domain profile. 95 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01098 362 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Pte18g01098 362 Gene3D Phosphorylase Kinase; domain 1 63 169 - -
Pte18g01098 362 Pfam Protein kinase domain 99 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01098 362 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 353 IPR046959 -
Pte18g01098 362 MobiDBLite consensus disorder prediction 28 47 - -
Pte18g01098 362 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01098 Pte-Chr18 23388117 23389549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01098 88 351 Receptor kinase-like Gene Family AT1G68400 40.614 1.47e-64 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g01098 Pkinase 6.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01098 - - qsa:O6P43_004595 454.907