Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01083 ATGGAGAGCTCACAAGGGAAGGTGGTTGCTGTCATCATGGTTGGAGGACCCACCAAAGGGACAAGATTTCGACCTCTTTCATTCAACACTCCAGAGCCTCTGTTTCCTTTGGCTGGGCAGCCAATGGTTTATCATCCTATTTCTGCCTGCAAAAGGATACCAAATTTGGCTCAAATATTTCTTATTGGCTTCTACGAAGAGCGTGAATTCTCACTGTATGCTTCTTCAGTTTCAAATGAGCTGAAAGTACCAGTAAGATATCTAAAGGAGGATAAACCGCATGGCTCAGCTGGTGGCCTATATTACTTCAGAGATATGATAATGGAAGAGAGCCCTTCACATATATTTCTACTAAACTGCGACGTTTGCTGCAGTTTTCCGCTACCAGACATGCTTGAAGCTCATAAGAGATACCACGGGATGGGTACAATGTTAGTAATTAAGGTTTCTGCTGAATCTGCCAGCCAATTTGGCGAGTTAGTTGCTGATCCTACCACCAAAGAATTGTTGCATTATACTGAGAAACCTGAAACTTTTGTGAGTGATTTGATAAATTGTGGTGTATATGTTTTTACTCCTGATATCTTCACTGCTATCGAAGGCGTGTCCACTAATGGGGAAGATAGAGCTAATCTACATCGTCTCTCCAGCTTTAAGGCTGTGCAGTTGCTGACAAGGAGCCTTCCAACTGATTTTGTAAGACTGGACCAAGACATTTTGTCACCTTTAGCGGGAAAGAAGCTGTTATATACGTATGAAACCATGGATTTCTGGCAGCAGATCAAGACCCCAGGAATGTCACTGAGATGCTCTGGTCTGTATCTCACCCATTTCCGTTACATCTCACCTAATCTGTTAGCCAGTGGAGATGGTACAAAAAATGCTACTGTTATTGGTGATGTTTATGTTCATCCCTCTGCAAAAGTCCATCCCATGTCAAAGATTGGTCCCAATGTTTCTATATCAGCAAATGTCCGTATAGGTGCAGGTGTGAGGTTGATAAATTGTATCATCTTGGATGATGTTGAGGTCAAGGAAAACGCTGTTGTTATAAATTCAATAGTTGGATGGAAATCATCAATTGGGAAATGGTCACGTGTTCAGGCTGAGGGTGACTACAACGCAAAGCTTGGGATAACCCTCCTTGGAGAAGCCGTCACTGTTGAAGATGAAGTTGTGGTGATCAATAGTATTGTCCTTCCAAATAAGACTCTTAATGTTAGCGTACAAGAGGAAATTATCTTGTAA 1248 0.4207 MESSQGKVVAVIMVGGPTKGTRFRPLSFNTPEPLFPLAGQPMVYHPISACKRIPNLAQIFLIGFYEEREFSLYASSVSNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEESPSHIFLLNCDVCCSFPLPDMLEAHKRYHGMGTMLVIKVSAESASQFGELVADPTTKELLHYTEKPETFVSDLINCGVYVFTPDIFTAIEGVSTNGEDRANLHRLSSFKAVQLLTRSLPTDFVRLDQDILSPLAGKKLLYTYETMDFWQQIKTPGMSLRCSGLYLTHFRYISPNLLASGDGTKNATVIGDVYVHPSAKVHPMSKIGPNVSISANVRIGAGVRLINCIILDDVEVKENAVVINSIVGWKSSIGKWSRVQAEGDYNAKLGITLLGEAVTVEDEVVVINSIVLPNKTLNVSVQEEIIL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01083 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Pte18g01083 415 Gene3D Hexapeptide repeat proteins 287 412 - -
Pte18g01083 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Pte18g01083 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Pte18g01083 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 415 - -
Pte18g01083 415 Pfam Nucleotidyl transferase 10 201 IPR005835 GO:0009058
Pte18g01083 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 357 IPR029044 -
Pte18g01083 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01083 Pte-Chr18 23244970 23249406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01083 20 367 Eukaryotic Initiation Factors Gene Family AT2G34970 21.845 5.37e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01083 K00966 - cave:132180851 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01083 18 23244970 23249406 Pte18g01083 18 23244970 23249406 RCT