Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01075 ATGGACAGCTCAACCGTGCTTAACGATGTTAGTGTTGATATTGACACTGAATCTATCGTTGCCAATTTTAATGGCCTAAGTTTCAGTAATCACGTTAGTATTAGTTTATGTAGCAGCACAGTTTCTGGGTCTGAAAACAGTGTAAGTAGTGGCAAGGTTAGCAGCAGCACAGTTGAGCCTCAAAAGATCACTGCTGAATCTTTGGTGGATTGTGGAGAAAGTGAGAAGAGCAGTTTGAGTTGTGTGAGTAATTATACTATTAATGATGGAAATGAGGCCAGTTTTAGGAGCATTTGCCTATGTAAACCACATAAGGGAAATGACATCAGATGGGATGCAATACAGTGCGTGAAGGTTAAAGATCGGGATTTGGGGTTGGGACATTTCAGGCTTTTGAAGAAGCTTGGTTGTGGGGACATAGGGAGTGTGTATTTGTCTGAGTTGAGAGGGATGGGGTGCCTTTTTGCAATGAAGGTCATGGACAAGGTCATGTTGTCTGGGAGAAAAAAGTTGGCTAGAGCTCAAACTGAGAGAGACATTTTGGCTTTGTTGGATCATCCATTTCTTCCCACCCTTTATTCACATTTTGAGACAGAAAAGTTTTCTTGCTTGCTTATGGAATTTTGTAGTGGTGGGGATCTTCATACACTCCGACAACGTCAACCAGGCAAGCACTTCACTGAGCAAGCAGCCAGGTTTTATGCAGCTGAGGTGCTACTTGCACTTGAATATTTGCACATGATGGGAGTGGTGTACAGGGACTTAAAGCCTGAAAATGTACTAGTGAGGGAGGATGGTCACATCATGCTCTCTGATTTTGATTTGTCACTGAAGTGCAATGTGAGCCCTACTCTCATTCAGACAACCACAAAACCATCTTGTCAGATGTCGTCTTATTGTATTCAACCATCATGCATTCATCCAGCTTGCAAATTACCTGTATGCGTAGAGCCTTCTTGTTTACAACCCTCATGTTTTAAGCCGAAATTCTCTAGCTCCAGACCATCCAAAGCGAAGCATGAGAAAATGAGTTCAACAAATTCAGATTCACTGCCAGTACTCATTGCAGAACCAACCCATGCTCGCTCTATGTCCTTTGTTGGTACTCATGAATATTTAGCACCAGAGATCATCAGAGGGGACGGTCATGGAAGTGCAGTGGACTGGTGGACCTTTGGGATATTTTTGTATGAGTTACTTCATGGAAGGACGCCATTCAAAGGCAATGGAAACCGGGAGACGCTGTTCAATGTTGTCGGTCAGCCTCTCAAGTTTGACGAGGGATGTAGTATCAGTTTTGCTGCGAAGGACTTAATTCGGGGATTGCTAGTAAAAGATCCAAAGAAGAGGTTTGGTTTCAAGCGAGGTGCTACAGAGATCAAACAACATCCTTTCTTTGGAACGGTGAATTGGGCTCTCATTCGCAGTACTCAACCCCCAGAAATTCCAAATCCGATCGACCTTACATTCCTAAGCCATAAATTGAAGTCCTCCGTACCTTCAAATGACAAGTGCACTACTGATTCAGATAGGTCATCATCTGGCCCTTACTTGGACTTCGATTTTTTCTGA 1572 0.4326 MDSSTVLNDVSVDIDTESIVANFNGLSFSNHVSISLCSSTVSGSENSVSSGKVSSSTVEPQKITAESLVDCGESEKSSLSCVSNYTINDGNEASFRSICLCKPHKGNDIRWDAIQCVKVKDRDLGLGHFRLLKKLGCGDIGSVYLSELRGMGCLFAMKVMDKVMLSGRKKLARAQTERDILALLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQPGKHFTEQAARFYAAEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLKCNVSPTLIQTTTKPSCQMSSYCIQPSCIHPACKLPVCVEPSCLQPSCFKPKFSSSRPSKAKHEKMSSTNSDSLPVLIAEPTHARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGRTPFKGNGNRETLFNVVGQPLKFDEGCSISFAAKDLIRGLLVKDPKKRFGFKRGATEIKQHPFFGTVNWALIRSTQPPEIPNPIDLTFLSHKLKSSVPSNDKCTTDSDRSSSGPYLDFDFF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01075 523 PANTHER FLIPPASE KINASE 1-RELATED 57 488 - -
Pte18g01075 523 SMART serkin_6 129 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01075 523 Gene3D Transferase(Phosphotransferase) domain 1 209 283 - -
Pte18g01075 523 FunFam serine/threonine-protein kinase D6PK-like 213 280 - -
Pte18g01075 523 Gene3D Transferase(Phosphotransferase) domain 1 361 484 - -
Pte18g01075 523 FunFam Serine/threonine-protein kinase D6PK-like 127 212 - -
Pte18g01075 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pte18g01075 523 ProSiteProfiles Protein kinase domain profile. 129 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01075 523 FunFam serine/threonine-protein kinase D6PK-like 361 484 - -
Pte18g01075 523 Pfam Protein kinase domain 130 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01075 523 Pfam Protein kinase domain 363 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01075 523 Gene3D Phosphorylase Kinase; domain 1 128 208 - -
Pte18g01075 523 SUPERFAMILY Protein kinase-like (PK-like) 109 495 IPR011009 -
Pte18g01075 523 CDD STKc_phototropin_like 128 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01075 Pte-Chr18 23164073 23166230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01075 89 524 AGC Kinase Gene Family AT5G40030 79.909 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte18g01075 Pkinase 5.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01075 K08286 - qsa:O6P43_009038 816.609