Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01068 ATGGATTTGAGTCATCTGATATCGGTGAAGGATGAAATGGATATGGGAAGTCAGCAGATGAGTTTGTTTGATGGCACTGATCACATGTCCTTGGGAGCTTTTTGTGTCAAGAAACGAAGAAGAGAGCCTGCTCCAGCCGGTGGTGATTGTCAAACTAAGCAACAAAAGCATAATAATCAGACTTCTGTAAAGGGCAATGTGAAGAGAAGTTCAAAGTTTCGCGGCGTCAGCAGGCATAGATGGACTGGCCGATATGAAGCTCACTTGTGGGATAAGCTCACCTGGAATGTAACACAGAAGAAGAAAGGAAAGCAAGGAGCTTATGATGAGGAAGAAGCTGCTGCTAGGGCATATGATTTAGCTGCCATTAAGTACTGGGGAACATCAACCTTCACTAATTTTCCGGTATCTGATTATGAGAAGGAGATTGAGATCATGCAGACAGTGACAAAAGAAGAATATTTGGCCTCTCTGCGAAGAAGGAGCAGTGGATTTTCAAGGGGTGTATCAAAGTACAGAGGGGTGGCAAGGCATCACCATAATGGTAAATGGGAAGCACGGATAGGAAGGGTTTTTGGAAACAAGTATCTCTACCTTGGCACTTACAGTACACAAGAGGAAGCTGCACGAGCTTATGACATTGCAGCCATTGAGTACAGAGGGATCCACGCAGTCACAAACTTTGATTTGAGCAATTACATACGATGGTTAAAGCCTACTGGAGAAAAGGCAGCAACAAACGAGCCTCCTCCTCCGGAACCTCAACCTGAAGAGCCTCGTGCACTGCCAAGCCTAACTGAGTTTATTCCAACTAAACCCAAATTCTCTTTATTCAATGGCGATCCCTTTGAACCAGAATGCTTAAATTTATCTCAAAAACTTGTTGGCTTCCAAAGCAGTACTGCCACGCCTAGCACATGCAAAAAGTCCTCTCCAACTGCACTGGGACTCCTTCTTCGATCGTCAGTATTTAGAGACTTGGTTGAAAAGAATCCGAATAGTGCCGAGAGTGAAATGGATTGGGGAGCGGCAAAGCTTCAGTTTCCAAATGTGAACGGGGATGATGATTTTGGTGACATCTTTTATGAGGGAATTGATGACATCCCATTTGCCTGCAACAGGGATGGCATACCATTGCAGGAAAGAGAGTTCTCCATTTTGTAA 1164 0.4442 MDLSHLISVKDEMDMGSQQMSLFDGTDHMSLGAFCVKKRRREPAPAGGDCQTKQQKHNNQTSVKGNVKRSSKFRGVSRHRWTGRYEAHLWDKLTWNVTQKKKGKQGAYDEEEAAARAYDLAAIKYWGTSTFTNFPVSDYEKEIEIMQTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGKWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSNYIRWLKPTGEKAATNEPPPPEPQPEEPRALPSLTEFIPTKPKFSLFNGDPFEPECLNLSQKLVGFQSSTATPSTCKKSSPTALGLLLRSSVFRDLVEKNPNSAESEMDWGAAKLQFPNVNGDDDFGDIFYEGIDDIPFACNRDGIPLQEREFSIL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01068 387 Pfam AP2 domain 170 221 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 Pfam AP2 domain 71 127 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 SMART rav1_2 72 141 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 SMART rav1_2 171 235 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 MobiDBLite consensus disorder prediction 42 69 - -
Pte18g01068 387 MobiDBLite consensus disorder prediction 242 261 - -
Pte18g01068 387 ProSiteProfiles AP2/ERF domain profile. 171 229 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 MobiDBLite consensus disorder prediction 245 259 - -
Pte18g01068 387 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 PRINTS Ethylene responsive element binding protein signature 211 231 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 MobiDBLite consensus disorder prediction 51 68 - -
Pte18g01068 387 SUPERFAMILY DNA-binding domain 71 137 IPR016177 GO:0003677
Pte18g01068 387 CDD AP2 170 231 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 Gene3D AP2/ERF domain 71 137 IPR036955 GO:0003700|GO:0006355
Pte18g01068 387 Gene3D AP2/ERF domain 170 231 IPR036955 GO:0003700|GO:0006355
Pte18g01068 387 FunFam AP2-like ethylene-responsive transcription factor 170 231 - -
Pte18g01068 387 SUPERFAMILY DNA-binding domain 170 231 IPR016177 GO:0003677
Pte18g01068 387 ProSiteProfiles AP2/ERF domain profile. 72 135 IPR001471 GO:0003700|GO:0006355
Pte18g01068 387 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 52 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01068 Pte-Chr18 23068189 23070628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01068 68 233 AP2-EREBP Transcription Factor Family AT5G57390 66.864 4.08e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte18g01068 AP2 3.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01068 - - pop:7495954 439.113