Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01063 ATGGCAATGGCTTATCTGAATAGAGTTTCGAGGACCGTCAGAGCAACGACACGCGTTAAAGTATTTTCCGCTTTACTTGAAGTAAATCCACTCTACACTAGAACAAACTGCTATAAAGAGTTTGCTTTGAACCGTGCATTATTCTGTTCACAATCACGGCACAACAGAAGAGACAATGAATGCGTAGATTTAACTCAATACCCACCAGAGAGAATCAGAAATTTCTCCATTATTGCCCATGTAGACCATGGAAAGTCTACTCTTGCCGATAGACTATTGGAGCTCACTGGGACGATTAAAAAGGGTCATGGTCAGCCTCAGTATCTTGACAAACTGCAGGTAGAAAGAGAAAGGGGAATCACCGTTAAAGCTCAGACAGCAACCATGTTTTATAAGCATGACCTCAGTGTACCTGACAATAGTGATAGTGGGTGTGACTCCTGTGATTTTTTGCTAAATCTTATCGACACACCCGGCCATGTGGATTTTAGCTATGAAGTATCTAGATCACTGGCAGCTTGCCAGGGTGTTCTGCTTGTTGTTGATGCTGCCCAAGGAGTCCAAGCGCAAACTGTTGCCAACTTTTACCTTGCTTTTGAAGCTAACCTGGCTATAATACCTGTCATAAACAAAATTGACCAGCCGACTGCAGATCCTGATGGTGTCAAAGCTCAGTTGCAAACAATGTTTGATCTTGATCCAAAGGATGCCCTTTTAACGTCTGCTAAAACGGGGCAGGGTCTTGACCAAGTTCTTCCTGCTGTCATAGAGCGTATACCACCGCCTCCTGGACAGAGTGGTTCTCCTCTGCGCATGCTTTTGCTGGATTCATATTATGATGAATACAAAGGAGTAATATGTCATGTTGCCGTCGTTGATGGTGCTTTGCGCAAGGGTGATAAGATTTCATCTGCAGCAACCAATCAGTCTTACGAAGTCCTGGATGTAGGAATTATGAATCCTGAACTGAAACCTACAGGAGGTCTACTAGCTGGACAAGTTGGGTATATTGTGACTGGCATGCGGTCTACCAAAGAGGCTCGTGTTGGTGATACACTATTCCATGTTAAAACCAGCGTGGAACCTCTTCCAGGTTTCAAACCAGCAAAACACATGGTTTTTTCTGGTCTTTACCCAGCAGATGGATCTGATTTTGAGGCACTCAGCCATGCAATTGACAGATTGACATGCAATGATGCGAGTGTCTCTATCACTAAAGAAAGTAGCACTGCACTAGGTTTAGGATTTAGGTGTGGCTTCTTAGGTTTGCTTCACATGGATGTTTTTCATCAACGGCTTGAGCAGGAATATGGAGCTCATGTCATTTCTACCATTCCAACTGTTCCTTACATATTCGAGTATGCTGATGGAAGCAAAGTACAAGTTCAGAACCCTGCCTCATTGCCATCTCAACCCAAACAACGAGTTACAGCCTCTTGGGAACCTACAGTAATCGCTACCATCATTATCCCTAGTGAGTACGTGGGGCCTGTAATTACCCTATGCTCTGATAGGAGAGGCCAGCAATTGGAGTATACATTTATTGATAGTCAGCGGGCATTTATGAAATATCGCTTACCACTGAGGGAGATTGTTGTTGATTTCTATAACGAATTGAAGAGCATAACATCTGGCTATGCTTCGTTTGACTATGAGGATTCAGAATATCAGGAAGCTGATCTAGTAAAACTCGATCTTCTGTTGAATAAACAACCTGTTGATGCAATGGCAACTATTGTTCATAACTTGAAAGCACAGCGTGTTGGTCGTGAACTGGTGGAGAAGTTGAAGAAATTTATAGACAGGCAAATGTTTGAGATAACGATACAAGCAGCAATTGGATCTAAGATCATTGCAGTGGAGAAGATATCTGCAATGAGGAAAAATGTTCTTGCAAAATGTTATGGTGGGGATGTTACTCGAAAAAGGAAGCTCTTGGAAAAGCAGAAGGAAGGGAAGAAGCGAATGAAACGTGTTGGGTCTGTTGATATTCCTCAAGAGGCATTTCATCAACTGTTGAAGGTCTCATGA 2031 0.4284 MAMAYLNRVSRTVRATTRVKVFSALLEVNPLYTRTNCYKEFALNRALFCSQSRHNRRDNECVDLTQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHDLSVPDNSDSGCDSCDFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFEANLAIIPVINKIDQPTADPDGVKAQLQTMFDLDPKDALLTSAKTGQGLDQVLPAVIERIPPPPGQSGSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATNQSYEVLDVGIMNPELKPTGGLLAGQVGYIVTGMRSTKEARVGDTLFHVKTSVEPLPGFKPAKHMVFSGLYPADGSDFEALSHAIDRLTCNDASVSITKESSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTIPTVPYIFEYADGSKVQVQNPASLPSQPKQRVTASWEPTVIATIIIPSEYVGPVITLCSDRRGQQLEYTFIDSQRAFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSEYQEADLVKLDLLLNKQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQMFEITIQAAIGSKIIAVEKISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHQLLKVS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01063 676 CDD EF4_II 270 355 - -
Pte18g01063 676 FunFam Translation factor GUF1, mitochondrial 364 445 - -
Pte18g01063 676 FunFam Translation factor GUF1, mitochondrial 265 363 - -
Pte18g01063 676 SUPERFAMILY EF-G C-terminal domain-like 480 574 IPR035647 -
Pte18g01063 676 Gene3D Translation factors 266 363 - -
Pte18g01063 676 Gene3D Elongation Factor G (Translational Gtpase), domain 3 364 445 - -
Pte18g01063 676 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 PRINTS GTP-binding elongation factor signature 205 214 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 PRINTS GTP-binding elongation factor signature 153 163 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 SUPERFAMILY EF-G C-terminal domain-like 372 449 IPR035647 -
Pte18g01063 676 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 263 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 Pfam Elongation factor Tu GTP binding domain 71 260 IPR000795 GO:0003924|GO:0005525
Pte18g01063 676 Pfam GTP-binding protein LepA C-terminus 568 674 IPR013842 -
Pte18g01063 676 Hamap Elongation factor 4 [lepA]. 65 676 IPR006297 GO:0005525
Pte18g01063 676 PANTHER TRANSLATION FACTOR GUF1-RELATED 44 675 IPR006297 GO:0005525
Pte18g01063 676 Gene3D - 446 559 - -
Pte18g01063 676 Gene3D - 560 634 IPR038363 -
Pte18g01063 676 NCBIfam small GTP-binding protein domain 73 251 IPR005225 GO:0005525
Pte18g01063 676 FunFam Translation factor GUF1, mitochondrial 560 634 - -
Pte18g01063 676 FunFam Elongation factor 4 69 264 - -
Pte18g01063 676 CDD lepA_C 481 560 IPR035654 -
Pte18g01063 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 301 IPR027417 -
Pte18g01063 676 Gene3D - 70 264 IPR027417 -
Pte18g01063 676 CDD LepA 73 259 - -
Pte18g01063 676 NCBIfam translation elongation factor 4 71 675 IPR006297 GO:0005525
Pte18g01063 676 CDD EF4_III 371 446 - -
Pte18g01063 676 FunFam Translation factor GUF1, mitochondrial 446 558 - -
Pte18g01063 676 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Pte18g01063 676 Pfam Elongation factor G C-terminus 481 565 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01063 Pte-Chr18 23042816 23048780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01063 72 214 Eukaryotic Initiation Factors Gene Family AT1G56070 40.278 1.81e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01063 K21594 - qsu:111987059 1113.21