Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01058 ATGGGATTGAGTCCGGAAATTATCCAAGCGGGTGGATTAAGTGTGGGAAAATCAAAGCGAACCAAGAAAAGAAATGGTGAAGCTGCGGGTACGGGATGGTGGTTGAAATTCATGTTAATGGGAAGGTGCATCCCTTCAATTTCCCGGTCCAAAAGAGAGGGTTCTCCAAATGCCAGTACCACGCAAGATGCTGAAAGTAAATCAACTACCGACACTGGGAGAGGCCAACCAGATGCTCCAGTTGCAACACCTTCAACAAATAGCACTGTTGTAAGTATGCCATCCACTCCCAACATAAGTGAGGAGCTAAAAGTGGCATCTCAACTTCGAAAGTTCTCATTTAACGAACTTAAGTTAGCAGCGAGGAATTTTAGACCTGAGAATCTTCTTGGTGAGGGTGGCTTTGGACGTGTATACAAAGGCTGGATCAATGAGCATGGGATCACTTTGGTCAAACCTGGAACAGGAATCACAGTTGCAGTAAAGACTCTTAACCATGACGGACTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTAATTATCTTGGGGAACTTCTTCACCACAATTTAGTTAAATTAATAGGATACTGTATTGAGGATGATCAAAGATTACTTGTGTATGAATTTATGGCTCGAGGAAGCTTGGAGAACCACCTTTTCAGAAGATCATTGCCGCTTCCTTGGATGATAAGAATGAAAATAGCACTTGGTGCAGCGAAGGGCCTTGCTTTCCTCCATGAAGAAGCTGAAAAGCCGGTTATATTTCGTGATTTTAAAACGTCTAATATCCTGTTAGATACGGATTACAATGCCAAACTTTCTGACTTTGGACTTGCCAAAGATGGTCCTGAGGGAGATAATACTCACGTGTCCACTAGAGTGATGGGGACTTATGGCTATGCTGCCCCAGAATATGTAATGACAGGACATCTCACTTCTAAAAGTGATGTTTACAGCTTCGGAGTGGTTTTGCTCGAAATGTTGACTGGCCTAAGATCCATGGACAAAAATCGGCCTAATGGAGCTCACAACTTAGTAGAATGGGCACGTCCACAACTTGGGGACAGAAGAAGGTTCTATCGTCTGGTTGATCCTAGGCTCGAAGGTCATTTCTCAATTAAGGGTGCTCAGAAAGTAGTTCAGTTGGCTGCTCACTGCCTTAGTCGTGATCCAAAAGCCAGACCTCTAATGAGTGAAGTTGTTGAAATTCTAAAACCTCTTCCTAAACTGAAGGATATGGCTTATTCTTCATCGTCCTTCCAGGCTATGCATGTAGAGCGTGTAACCTCCAGCAAAGCTAAAAGCGTTAACAGAATGCCCTCTGGGCTATCAAGGAATGGACCAATAATCAAAGGTTTCTCAAATGGTCCCCCTGCCTCTCCTTATCGTCTCAACCATCCTCATCGGTCCCCTAAACCTAATGGTGGGAAATCTTGA 1437 0.4384 MGLSPEIIQAGGLSVGKSKRTKKRNGEAAGTGWWLKFMLMGRCIPSISRSKREGSPNASTTQDAESKSTTDTGRGQPDAPVATPSTNSTVVSMPSTPNISEELKVASQLRKFSFNELKLAARNFRPENLLGEGGFGRVYKGWINEHGITLVKPGTGITVAVKTLNHDGLQGHKEWLAEVNYLGELLHHNLVKLIGYCIEDDQRLLVYEFMARGSLENHLFRRSLPLPWMIRMKIALGAAKGLAFLHEEAEKPVIFRDFKTSNILLDTDYNAKLSDFGLAKDGPEGDNTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGLRSMDKNRPNGAHNLVEWARPQLGDRRRFYRLVDPRLEGHFSIKGAQKVVQLAAHCLSRDPKARPLMSEVVEILKPLPKLKDMAYSSSSFQAMHVERVTSSKAKSVNRMPSGLSRNGPIIKGFSNGPPASPYRLNHPHRSPKPNGGKS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01058 478 FunFam Probable serine/threonine-protein kinase PBL8 210 424 - -
Pte18g01058 478 FunFam Serine/threonine-protein kinase BIK1 91 209 - -
Pte18g01058 478 Gene3D Transferase(Phosphotransferase) domain 1 210 429 - -
Pte18g01058 478 MobiDBLite consensus disorder prediction 1 26 - -
Pte18g01058 478 Gene3D Phosphorylase Kinase; domain 1 99 209 - -
Pte18g01058 478 Pfam Protein tyrosine and serine/threonine kinase 128 404 IPR001245 GO:0004672|GO:0006468
Pte18g01058 478 SUPERFAMILY Protein kinase-like (PK-like) 109 430 IPR011009 -
Pte18g01058 478 PANTHER OS01G0588500 PROTEIN-RELATED 67 407 - -
Pte18g01058 478 MobiDBLite consensus disorder prediction 431 478 - -
Pte18g01058 478 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Pte18g01058 478 MobiDBLite consensus disorder prediction 50 95 - -
Pte18g01058 478 ProSiteProfiles Protein kinase domain profile. 124 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01058 478 MobiDBLite consensus disorder prediction 47 95 - -
Pte18g01058 478 CDD STKc_IRAK 130 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01058 Pte-Chr18 22999027 23003325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01058 98 404 Glycoside Hydrolase AT3G07070 55.769 1.40e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte18g01058 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01058 - - qsa:O6P43_009064 731.095