Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01054 ATGGCTGAAGCTACCGAGCAGCCTAAAGCATCGACTGCAGCTGAGAAGAAGAAGGAGCAGAGCTTACCCTTTCACAAGCTTTTCTCTTTTGCAGACAAGTATGATTGGGTGCTCATGGTATCTGGAAGTTTAGGAGCTATTGTACATGGCTCCTCAATGCCTGTTTTCTTCCTTCTCTTTGGAGAAATGGTAAACGGGTTTGGCAAAAACCAGTCTGATTTGAAGAAAATGACTGAAGAAGTATCCAAGTATGCTCTGTATTTTGTCTACCTCGGTCTAGTTGTTTGCATATCATCGTATGCAGAGATTTCATGCTGGATGTACTCTGGAGAGAGACAGACAAGCACATTGAGAAAAAAGTATTTGGAAGCAGTGCTCAAACAAGACGTTGGATTCTTTGATACTGATGCTAGAACTGGTGATATTGTATTTAGTGTGTCCACAGACACGTTGCTTGTCCAAGATGCTATCAGTGAGAAGGTTGGGAACTTTATACATTATCTTTCAACGTTTCTTGCTGGACTGGTGGTTGGTTTTGTATCGGCGTGGAGGTTAGCTCTTCTAAGTGTAGCTATAATTCCAGGAATTGCATTTGCTGGTTGCCTGTATGCTTACACTCTCACTGGTCTGACGTCCAAGAGTAGAGAATCATATGCTAATGCTGGCGTAATTGCTGAGCAGGGTATTGCTCAAGTACGGACTGTCTATTCATATGTTGGCGAGAGCAAGGCTCTAAATTCTTATTCTGATGCTATACAAAACACATTAAAGCTTGGCTACAAGGCTGGTATGGCCAAAGGTCTTGGCCTAGGATGTACTTATGGAATAGCCTGCATGTCTTGGGCACTTGTTTTCTGGTATGCTGGTGTTTTCATCAGGAATGGACAGACTGATGGAGGCAAGGCATTTACGGCTATTTTTTCTGCCATAGTTGGTGGCATGAGTTTGGGTCAGTCCTTTTCAAATCTTGGGGCCTTTAGTAAAGGCAAAACAGCTGGTTATAAGTTGATGGAAATCATTAAGCAGAAGCCCTCCATAGTAGAAGACACTTCAGATGGAAAGTATCTAGCTGAGATTAGTGGAAATATTGAATTTAAGGATGTCAGTTTTAGCTATCCATCAAGGCCTGATGTAATGATATTCCGCAATTTCTCAATCTTTTTCCCTGCTGGAAAAACTGTTGCAGTTGTTGGTGGAAGTGGCTCAGGAAAAAGCACGGTTGTTGCCTTGATAGAAAGATTTTATGATCCAAATGAAGCCAATTTTGCCCAGCAATTATCTCTCAAAGGATTTGCTGGGGACACAGCCAAGGCTCATGCCAAGACAAGCATGATTGCTGGAGAGGGAGTCAGCAACATTAGAACTGTTGCTGCTTTCAATGCCCAAAATAAGATCCTTTCACTATTTTGCCACGAGCTCCGTATCCCTGAGCTTCAAAGCTTGCGGAAGAGCCAAACTTCTGGCCTCTTATTTGGTCTTTCTCAGCTTGCTCTATATGCCTCGGAAGCACTCATTCTATGGTACGGTGCACATCTTGTGAGCAAAGGGGTCTCGACCTTTTCAAAGGTTATTAAAGTCTTCGTGGTCCTAGTCATCACGGCTAACTCAGTTGCTGAAACTGTAAGCCTCGCACCTGAGATCATAAGAGGTGGTGAGGCAGTTGGCTCGGTCTTCTCAATTCTCGACAGACCAACTAGGATTGATCCAGATGACCCTGATGCCGAGCCAGTTGAAACAATTCGTGGCGAAATTGAACTAAGACATGTTGATTTTGCTTACCCTTCAAGGCCTGATATTATGGTTTTCAAGGATTTTAATCTTAGAATTCGCGCTGGACAGAGTCAAGCACTTGTTGGGGCAAGTGGCTCGGGCAAGAGTTCTGTCATTGCACTTATCGAGCGGTTCTATGATCCCATTGGTGGAAAAGTTATGATAGATGGAAAAGATGCTTTTCCAGCACTGACTTTCTCAGTGCATGGATTTCCTAACATATCTTCAGTTCACAAGGTGAGGATAATTTTCTAG 2025 0.4326 MAEATEQPKASTAAEKKKEQSLPFHKLFSFADKYDWVLMVSGSLGAIVHGSSMPVFFLLFGEMVNGFGKNQSDLKKMTEEVSKYALYFVYLGLVVCISSYAEISCWMYSGERQTSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAIIPGIAFAGCLYAYTLTGLTSKSRESYANAGVIAEQGIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKTAGYKLMEIIKQKPSIVEDTSDGKYLAEISGNIEFKDVSFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVALIERFYDPNEANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRIPELQSLRKSQTSGLLFGLSQLALYASEALILWYGAHLVSKGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRPTRIDPDDPDAEPVETIRGEIELRHVDFAYPSRPDIMVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIGGKVMIDGKDAFPALTFSVHGFPNISSVHKVRIIF* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01054 674 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 336 - -
Pte18g01054 674 Gene3D - 574 649 IPR027417 -
Pte18g01054 674 Gene3D - 353 419 IPR027417 -
Pte18g01054 674 SUPERFAMILY ABC transporter transmembrane region 19 348 IPR036640 GO:0005524|GO:0016020
Pte18g01054 674 FunFam ABC transporter B family member 1 26 362 - -
Pte18g01054 674 Pfam ABC transporter 382 446 IPR003439 GO:0005524
Pte18g01054 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 650 IPR027417 -
Pte18g01054 674 PANTHER ABC TRANSPORTER B FAMILY 7 420 IPR039421 -
Pte18g01054 674 Pfam ABC transporter 603 650 IPR003439 GO:0005524
Pte18g01054 674 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 42 328 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01054 674 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 428 549 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01054 674 Gene3D ABC transporter type 1, transmembrane domain 427 573 IPR036640 GO:0005524|GO:0016020
Pte18g01054 674 Gene3D ABC transporter type 1, transmembrane domain 26 352 IPR036640 GO:0005524|GO:0016020
Pte18g01054 674 SUPERFAMILY ABC transporter transmembrane region 428 571 IPR036640 GO:0005524|GO:0016020
Pte18g01054 674 Pfam ABC transporter transmembrane region 430 533 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01054 674 Pfam ABC transporter transmembrane region 44 313 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte18g01054 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01054 Pte-Chr18 22973715 22980626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01054 424 649 Calmodulin-binding Proteins AT2G36910 55.507 3.50e-79 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01054 K05658 - cave:132180674 765.377