Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01032 ATGGGTTGCATTAATTCAAAGCATGTCTGCGGGAAATCTAAGTGTTCACGTCCATTATCACCTGCTCCTTATGTATACTCCGTAGCTACTGGTACAGAAAATGGCTCTTTGATTATGGACCCTGCACCAACCTCCAAGATACTATCGGGGACTTTGGTTTTTGATACAAAAAGGGAAGGAAAGCCATCAGAGGAAAAGAGCCGAGAATTGAAGAGGGCATCAAGAAAGGCAAACTCTAACAGCAGAGGCAGTTTCAGCTTCAGGCTTACGTTACCTCATAGGCACGTCCAAGCAGAGCAGAATGCAGCTGGTTGGCCTTTTTGGCTCACAGCTTTTGCAGGGGAAGCCGTTCATGGCTGGGTACCCCTCAAAGCAGATAGCTTTGAAAAATTGGAGAAGATTGGCCAAGGTACTTACAGCAGTGTGTTTCGAGCGCGTGAAGTTGAAACCGGGAGGATGGTTGCCTTAAAGAAGGTGCGATTTGATAATCTTCTGCCAGAGAGCATTAGGTTCATGTCACGAGAAATAACTATTCTGCGCAGACTTGACCATCCTAATATCATGAAGTTGGAGGGGCTGATTACATCTCGGTTGTCAAACAGCATATACTTCGTATTTGAATACATGGAACACGATCTTGCTGGCCTAGTATCTTCTCCCGACATCAAATTCAGTGAATCCCAGGTGAAATGTTACATGAGGCAGCTGTTGAATGGCATTGAACACTTCCACCAGCGTGATATAATGCACCGAGACATTAAGACCTCCAATATATTGGTAAACAATGAGGGAATTCTGAAAATAGCAGATTTTGGTTTGGCGAATACCCTGAGCTCAAGTAACAAGCAACCACTAACCAGTCGTGTTGTAACCCTATGGTATCGTCCACCTGAATTACTGATGGGATCGACTGATTACAACGTGTCGGTAGATCTCTGGAGTGTGGGCTGTGTGTTTGCTGAACTTTACCTGGGGAAGCCCCTACTAAAAGGGAGAACAGAGGTTGAGAAAAGGGAAGTAAAGGTTCTATTGAACTTGGAAGAATATGGGGTTGAACAGTTACACAAGATCTTTAAATTTTGTGGTTCTCCACCTTACGAGTTCTGGAAAAAATCTAAGCTCCCTCATGCAACTATGTTCAAACCCCAAAATCATTATGATAGTTCTCTTCGGGAAAGGCTTTTTGATTTTCCACAAACCGCGATGGACCTTATAGAAACTTTGTTGTCAGTAGAACCTTACAAGCGAGGCACTGCCTCCTCAGCATTGATGTCTGAGTACTTCAGCACAGAGCCATATGCATGTGATCCATCAATCCTACCAAAATATCCTCCTAACAAAGAAATAGATGCTAAAATTAGAGAAGACATCCTCAGGAAAAAGGCTGGTCTTAAAGCAAGAGGATCACACTCAAGAGCATCAAGAAAGGAACACATATCTCGTAAAGTCTTACAAGAGCCAAACAAAATCTACAAAGCAGCATCAAGAGAGAAGATGCAGAACAATGGCCAAACCGTTTGCAGAGACAATGTCAATGATGCAGATGTATTGAAGCAACCTTTTGACAGAGTGTCAGAGACTTCGCAGGTTAATGGTTTTCATGACTATGAAAATTATTCTGGACCAATACAAATTGCAGGATCTAGTGGCTTTACATCGGCAAATCGAGCTGTAGACGTAGCTTCTGTATTGTCAGATGGCTCAAAAAGCAAAGTCAGTGCATTAGATCCATCATTTGTAAAGGGCACATATAAGTTAAACAAAGACAGAAACATGGATATTCCTGTGGATAAATATGTGAACAGGATCAAGAACACCAGTCAGCATCATTGGTTAGGTCGACCAGAATCGTTTGATACAGCTCCATTTTGCATCTGTAGGGATGTATGTGTTGATTATCAAGGTAAAGAACCCATTGATATTCACCAAGATGATCAGGGTCCTGAAAGTCCAGAAGATATGATTGAAATCTCAGGCACATTGGTTTCCCGGATCAAATTTGAAGAAATGTTGAGAGCCAAAGAATCTCATGCTCGTCGAAAATCAAGGTTTGAAAGAGAGAAATGA 2067 0.4228 MGCINSKHVCGKSKCSRPLSPAPYVYSVATGTENGSLIMDPAPTSKILSGTLVFDTKREGKPSEEKSRELKRASRKANSNSRGSFSFRLTLPHRHVQAEQNAAGWPFWLTAFAGEAVHGWVPLKADSFEKLEKIGQGTYSSVFRAREVETGRMVALKKVRFDNLLPESIRFMSREITILRRLDHPNIMKLEGLITSRLSNSIYFVFEYMEHDLAGLVSSPDIKFSESQVKCYMRQLLNGIEHFHQRDIMHRDIKTSNILVNNEGILKIADFGLANTLSSSNKQPLTSRVVTLWYRPPELLMGSTDYNVSVDLWSVGCVFAELYLGKPLLKGRTEVEKREVKVLLNLEEYGVEQLHKIFKFCGSPPYEFWKKSKLPHATMFKPQNHYDSSLRERLFDFPQTAMDLIETLLSVEPYKRGTASSALMSEYFSTEPYACDPSILPKYPPNKEIDAKIREDILRKKAGLKARGSHSRASRKEHISRKVLQEPNKIYKAASREKMQNNGQTVCRDNVNDADVLKQPFDRVSETSQVNGFHDYENYSGPIQIAGSSGFTSANRAVDVASVLSDGSKSKVSALDPSFVKGTYKLNKDRNMDIPVDKYVNRIKNTSQHHWLGRPESFDTAPFCICRDVCVDYQGKEPIDIHQDDQGPESPEDMIEISGTLVSRIKFEEMLRAKESHARRKSRFEREK* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01032 688 Gene3D Phosphorylase Kinase; domain 1 115 210 - -
Pte18g01032 688 FunFam probable serine/threonine-protein kinase At1g54610 115 210 - -
Pte18g01032 688 Pfam Protein kinase domain 128 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01032 688 SUPERFAMILY Protein kinase-like (PK-like) 122 434 IPR011009 -
Pte18g01032 688 ProSiteProfiles Protein kinase domain profile. 128 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01032 688 FunFam probable serine/threonine-protein kinase At1g54610 211 467 - -
Pte18g01032 688 MobiDBLite consensus disorder prediction 57 76 - -
Pte18g01032 688 SMART serkin_6 128 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01032 688 PANTHER CELL DIVISION PROTEIN KINASE 126 432 - -
Pte18g01032 688 MobiDBLite consensus disorder prediction 56 81 - -
Pte18g01032 688 CDD STKc_CDK9_like 128 428 - -
Pte18g01032 688 Gene3D Transferase(Phosphotransferase) domain 1 211 465 - -
Pte18g01032 688 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Pte18g01032 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01032 Pte-Chr18 22738781 22743468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01032 120 460 Core Cell Cycle Gene Families AT5G10270 43.539 1.13e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte18g01032 Pkinase 2.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01032 - - qsa:O6P43_004446 794.653