Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01031 ATGGCGAAGACTGGAGATTCGGTGCCTGCAGTACCGCCACGTCCTACAATAACATTACCACCTCGCCCTTCCATGGAGGCTCTCTTCTCTGGTGGCTTTGGTGTGAGCCCAGGTCCTATGACTCTTGTCTCTAACTTCCTCTCTCCTGACAATAACTGCTCCTTTTCTCAGCTACTTGCTGGTGCCATGGCTTCTCCTATTGCACATGCTGGTAGGCCCAACAGTTTCTTTCCGGACAATAACATGGATAACTCTGGTAAAGAAAAGGGTTATGGAGAACGTGCTGATAAGGATTTCGGTTTCAGGCAGAGTAGGCCCATGAGTTTGGCGGTTGCTCGTTCACCAATGTTTACAATCCCAACTGGGTTGAGCCCTTCCGGTTTGCTCAATTCTCCGGGATTTTTTTCTCCCCATAGTCCATTTGGAATGTCTCATCAGCAAGCTCTAGCACAGGTAACAGCTCAAGCTGTGCTGGCGCAACAATCTCAGATGTATTTGCAAGCTGATTACCAGCCTCATACAGTCAGGTCACCCTCTGAGTCTATTGCTCGTCAGCCTTCCCTTAATCCCAATGAAGGTTCTGACCTACAGGTGGTACCAGCCACGTCAAATTGTACAATGGCAGGAATTGAATCAGCTGAGGCTTCTCAAGGCAATAAGAAATATCAATCTTCTCCATTAATTGTTGACAAACCAGCAGATGATGGCTACAACTGGAGAAAATATGGCCAAAAGCAAGTAAAGGGGAGTGAATATCCAAGAAGTTACTACAAGTGCACTCATTTGAACTGTCCAGTGAAGAAAAAAGTAGAGCGTTCCCCTGAGGGCCAAATAACTGAGATTATCTACAAGGGTCAGCATAACCATGAGGTTCCACAACAGAATAAGCGTGCAAAAGATGGTAATAATTCAATTGGGAATCTAGACATCCAAGCTAGAAGTGAACTTCGTCCACAAATTTCGGGAGGAAATTCAACTATGTCCAGTGAAATTGTGCATGCTCAATCAGTGCCAGCGGGTTTAGGGTGTAATCAGGAGTTATCTATGCAATTACATGGATCTAGTGATAATGAAGAGGCTTATGGTGCTGACGGGAGAGAAAAAAAGGACAATCATGACGAACCACCTGCAAAGAGGAGGAATACTGAATCTGCAGTTTCTGAATTACCCTTGTCACAAAATACCACAAGTGAACCAAAAATCATTGTGCAGACAAGAAGTGAAGTTGATCTTCTAGATGATGGCTACAGATGGCGCAAATATGGACAAAAGGTGGTCAAGGGAAATCCTCACCCAAGGTTGAGAGAATGCTTGTGGCACCCCGTAGGAAGTCATGGAGAGCATTGCATCTTTTGGTTCAGGAGCTATTACAAATGCACTAGTGCAGGATGCAATGTCCGGAAGCATGTTGAGAGAGCTTCAACAGACCCAAAGGCTGTTATAACTACGTATGAAGGTAAACATAACCATGATGTTCCTGTGGGAAGAAATAGCAGCCATAGTTCAGTTCACGGCAATGCCATGCCGTCAAAAGCACACATGGGAGTTCCTGAGAAACGTCATTTGCTTAAAGATGTGAATATTGGAAAAGATGACCAAAGACCTGTTGCTTTGCGCTTAAAAGAAGAACATATTGCTTTGTAG 1644 0.4465 MAKTGDSVPAVPPRPTITLPPRPSMEALFSGGFGVSPGPMTLVSNFLSPDNNCSFSQLLAGAMASPIAHAGRPNSFFPDNNMDNSGKEKGYGERADKDFGFRQSRPMSLAVARSPMFTIPTGLSPSGLLNSPGFFSPHSPFGMSHQQALAQVTAQAVLAQQSQMYLQADYQPHTVRSPSESIARQPSLNPNEGSDLQVVPATSNCTMAGIESAEASQGNKKYQSSPLIVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERSPEGQITEIIYKGQHNHEVPQQNKRAKDGNNSIGNLDIQARSELRPQISGGNSTMSSEIVHAQSVPAGLGCNQELSMQLHGSSDNEEAYGADGREKKDNHDEPPAKRRNTESAVSELPLSQNTTSEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRLRECLWHPVGSHGEHCIFWFRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPVGRNSSHSSVHGNAMPSKAHMGVPEKRHLLKDVNIGKDDQRPVALRLKEEHIAL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01031 547 SUPERFAMILY WRKY DNA-binding domain 231 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 MobiDBLite consensus disorder prediction 74 95 - -
Pte18g01031 547 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 130 508 IPR044810 GO:0003700
Pte18g01031 547 SMART WRKY_cls 412 492 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 ProSiteProfiles WRKY domain profile. 407 493 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 MobiDBLite consensus disorder prediction 352 398 - -
Pte18g01031 547 MobiDBLite consensus disorder prediction 488 512 - -
Pte18g01031 547 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 MobiDBLite consensus disorder prediction 283 306 - -
Pte18g01031 547 FunFam WRKY transcription factor 220 293 - -
Pte18g01031 547 Pfam WRKY DNA -binding domain 454 490 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 Pfam WRKY DNA -binding domain 413 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 SUPERFAMILY WRKY DNA-binding domain 404 493 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 MobiDBLite consensus disorder prediction 1 23 - -
Pte18g01031 547 MobiDBLite consensus disorder prediction 359 381 - -
Pte18g01031 547 Gene3D WRKY domain 396 494 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g01031 547 Gene3D WRKY domain 223 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01031 Pte-Chr18 22732862 22736745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01031 14 546 WRKY Transcription Factor Family AT2G03340 48.925 3.35e-137 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g01031 WRKY 7.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01031 - - qsa:O6P43_004445 642.499