Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01026 ATGGGGTCAAGGATCACAAAGCAGCAGCAGCCAGGCAAAGTTAATCGGATATCTACAGTTTCTACACGAAGTAGCTTCATCAAATACTTCGCGATAAATTTTTATATCCGTAACTTGGTATCCAAGAAAAGGAGGAGAATGCTTGTTGCTGGTTATGATCTTGATATGTCATACATTACAGATCGACTACTGGCCATGTCATTTCCTGCGCAAGATGTGAGAGCTATGTATCGAAATCCTCTCTGGCAGGTTAAGTCCGTTTTGGACATGAGACATCAGGGACACTATAAGATATATAATCTCTGTACAGAGGAATCTTATGATCCATCCCATTTCCATGGTCGAGTGGAAGGCTATCCTTTTGATGACAATCATGTTCCTCCTCTAGAACTCATCAAGCAATTCTGTGAAAGTGTCGGTACCTGGCTAGCAAGTGACCCGAAGAACATAGCTGTGATTCATTGCATGGCTGGCAAAGGTCGCACGGGTCTAATGGTGTGTGCCTACCTCGTTTACTGTGGTATGTCAGCAGAGGAAGCTCTTCAACTATATGCTGTCAGACGTACCACCAATAATGAAGGAGTATCTATACCAAGCCAAAGGCGTTATGTGGGGTACTGGGAAAAGACGCTTTCTTTTGATAAGGGAGTTGGTCATGGAAAACACACAGCGTGCTTGCCTCAACCAAGAACTAGAGAGCTGCGGCGAATACGACTTTATGATACTGTAAATATCGAATCTATCTTCGTCGTAGTCTCACAGCTGCAGCCAATTCCAAATGAGAAATACTATCCACCTGTTGAAATAACAAGGACTTTCTGTCGACGAATTGAAAAAGGTTATCACAGGAATAACAGTCCTCGTTATTACATATCTTTTGTTGATGGAGATGAAGATACATCAGAACCAGATGAACCTCGAGTTGTGCAGCAAATGGATACAGAGATTCCCATGCTATATCAGAAAAGCTGTCTGGAGCATTACTTTGATAAACCTGTACGAGTTACTGGAGATGTGCGCGTGATATTCTACCAGAAGATGATAGGAGGTCGACTATTCTATTGCTGCTTCAATACTGCCTTCATTAGCAACAGTTTGCTACAGCTCAAAATGCTGGATTTGGACAAACTTGGGAAGAAAGGAGCATCAATATGCGGCCCTACCTTCTGCTTGGAATTGCTATTTGGTCCTGCCAATGCAAGACAACTGGCGTCAGAGCCTGCTAACGGTGGCGATTGA 1239 0.4326 MGSRITKQQQPGKVNRISTVSTRSSFIKYFAINFYIRNLVSKKRRRMLVAGYDLDMSYITDRLLAMSFPAQDVRAMYRNPLWQVKSVLDMRHQGHYKIYNLCTEESYDPSHFHGRVEGYPFDDNHVPPLELIKQFCESVGTWLASDPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSAEEALQLYAVRRTTNNEGVSIPSQRRYVGYWEKTLSFDKGVGHGKHTACLPQPRTRELRRIRLYDTVNIESIFVVVSQLQPIPNEKYYPPVEITRTFCRRIEKGYHRNNSPRYYISFVDGDEDTSEPDEPRVVQQMDTEIPMLYQKSCLEHYFDKPVRVTGDVRVIFYQKMIGGRLFYCCFNTAFISNSLLQLKMLDLDKLGKKGASICGPTFCLELLFGPANARQLASEPANGGD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01026 412 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Pte18g01026 412 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 322 397 IPR035892 -
Pte18g01026 412 ProSiteProfiles Phosphatase tensin-type domain profile. 45 214 IPR029023 -
Pte18g01026 412 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 402 - -
Pte18g01026 412 ProSiteProfiles C2 tensin-type domain profile. 245 398 IPR014020 -
Pte18g01026 412 SMART PTEN_C2_2 227 397 IPR014020 -
Pte18g01026 412 Pfam C2 domain of PTEN tumour-suppressor protein 312 395 IPR014020 -
Pte18g01026 412 Gene3D - 266 400 - -
Pte18g01026 412 Pfam Tyrosine phosphatase family 143 190 IPR026893 GO:0004721
Pte18g01026 412 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 133 188 IPR000387 GO:0016311|GO:0016791
Pte18g01026 412 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 32 215 - -
Pte18g01026 412 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 211 IPR029021 -
Pte18g01026 412 CDD PTP_PTEN 55 209 IPR045101 GO:0016791
Pte18g01026 412 Gene3D Protein tyrosine phosphatase superfamily 31 214 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01026 Pte-Chr18 22696838 22699469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01026 22 401 Protein tyrosine phosphatase (PTP) family AT5G39400 65.885 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01026 K01110 - qsa:O6P43_004433 611.683