Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01025 ATGTTCAACTTTCTCTTCTTCCTCCCTAGGTGGATGGGTGGCCGATTCCTGGGACAGAATTCACAGACCAACAGCGGTGGAAGCAGTGAAGATGCAAGTAACGTTGTTACAGAAAGCCCTATCTCGAATGGCGTCGAGTGTTTCGCATGCACTCAGGCTGGAGTCCCAGTCTTCCATTCAACAAGTTGCGACGGCGCTCATCAACCGCCGCATTGGGAGGCCTCCGCAGGCTCTTCTCTAATCCCAATCCAAAACTGTTCCACCAAATCAACCGACCCGATCCGAAGATTTCAAACCACCTATGGTCCCTTCGGCAAGGTGCTAGACCCGCGTAGCAAGCGCGTACAGAGATGGAACCGTGCGTTTCTGTTGGCGCGTGGCTTAGCACTGGCCATAGACCCGCTTTTCTTCTACGCGCTGTCCATAGGAAGAGGTGGTTCGCCCTGCCTGTACATGGATGGCAGTCTTGCCGCCGTCGTGACGGTGCTTCGCACGGTGGTGGATGGGGTGCACCTCTTCCACCTATGGCTTCAGTTCCGGTTGGCCTATGTTTCGAGAGAATCACTGGTTATTGGTTGTGGAAAACTCGTGTGGGACGCACGTGCGATCGCTCTCCACTACGTTCGGTCTTTCAAAGGTTTCTGGTTTGATGTTTTTGTCATTCTACCTATACCGCAGGCCGTATTTTGGTTGGTTGTGCCGAAATTGATCAGAGAGGAGCAAATCAAAATCATAATGACTATGATGCTACTAATTTTCTTGTTCCAGTTCCTACCAAAGGTTTATCACAGCATATGCTTAATGAGAAGCATGCAAAAAGTTACAGGGTACATCTTTGGCACCATCTGGTGGGGTTTTGGCCTCAACCTGATTGCCTATTTCATTGCTTCTCATGTTGCTGGAGGATGCTGGTATGTCCTTGCAGTACAGCGTGTTGCTTTGTGCCTCCGTCAACAGTGTGAAAGATTTCCAAAGTGCAATCTATCTCTCTCATGCTCAGAGGAGATCTGTTACAACTTTTTCTCACAAGGAAGCACTTTAGGGAATCAGTGTGGTGGAAACTCAACAATGGCGTTCAGTATGCCACAATGCTTAGATGTGAATGGCCCTTTTAGGTATGGCATTTATCAATGGGCTCTTCCCGTGGTTTCTAGCAATTCCCTCGCTGTTAAGATCTTGTACCCCATATTTTGGGGCTTGATGACGCTCAGTACTTTTGGCAACGATCTTGAACCAACAAGCCACTGGTTAGAAGTGATTTTCAGCATATCCATGGTGCTTAGTGGACTCTTGCTTTTCACTTTGTTGATAGGGAATATACAGGTATTCTTACATACAGTCATGGCCAAAAAAAGAAAAATGCAGCTGAGATGCCGAGACATGGAATGGTGGATGAGAAGGAGACAACTGCCATCTCGTTTGAGACAAAGAGTACGCCATTATGAACGTCATAGATGGGCAGCAATGGGAGGAGAAGATGAGATGGAACTGATCAAAGACCTTCCAGAAGGGCTCAGACGAGACATTAAACGGTACCTTTGTCTAGACCTTATCAAGAAGGTACCTTTGTTTCACAACATGGATGATCTTATTCTTGACAATATCTGCGACCGTGTTAAACCGCTTGTCTTCTCCAAAGATGAAAAGTTAACCATAGAAGGAGATCCTGTACCAAGGATGGTGTTCATTGTTCGTGGTCGGATAAAGCGGTCCCAAAGTCTAAGCAAAGGGGTGGTGGCAACTAGCATACTTGAACCAGGAGATTTCTTTGGGGACGAGCTCCTCTCATGGTGTCTTCGCCGTCCGTTTATAGATCGGCTTCCTGCCTCATCTGCAACATTTGTTTCAATGGAACCAACAGAAGCATTTGCACTTGATGCAGAGCAACTGAGGTTCATCACCGATCACTTCCGTTACAAATTCTCCAATGAAAGGCTCAAGAGAACAGCAAGGTATTACTCATCTAATTGGAGAACATGGGCAGCCGTCAACATACAATTTGCTTGGCGGCGTTACAAGAAGAGGACTAGAGGTCCATTGACTCCTGTGATGGATCAGGACGGAAGCACTGATCGACGGCTCCTGCAGTATGCAGCAATGTTCATGTCACTAAGGCCACATGATCATCTTGATTGA 2136 0.4724 MFNFLFFLPRWMGGRFLGQNSQTNSGGSSEDASNVVTESPISNGVECFACTQAGVPVFHSTSCDGAHQPPHWEASAGSSLIPIQNCSTKSTDPIRRFQTTYGPFGKVLDPRSKRVQRWNRAFLLARGLALAIDPLFFYALSIGRGGSPCLYMDGSLAAVVTVLRTVVDGVHLFHLWLQFRLAYVSRESLVIGCGKLVWDARAIALHYVRSFKGFWFDVFVILPIPQAVFWLVVPKLIREEQIKIIMTMMLLIFLFQFLPKVYHSICLMRSMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAVQRVALCLRQQCERFPKCNLSLSCSEEICYNFFSQGSTLGNQCGGNSTMAFSMPQCLDVNGPFRYGIYQWALPVVSSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSISMVLSGLLLFTLLIGNIQVFLHTVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHYERHRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNMDDLILDNICDRVKPLVFSKDEKLTIEGDPVPRMVFIVRGRIKRSQSLSKGVVATSILEPGDFFGDELLSWCLRRPFIDRLPASSATFVSMEPTEAFALDAEQLRFITDHFRYKFSNERLKRTARYYSSNWRTWAAVNIQFAWRRYKKRTRGPLTPVMDQDGSTDRRLLQYAAMFMSLRPHDHLD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01025 711 Gene3D Jelly Rolls 521 639 IPR014710 -
Pte18g01025 711 SUPERFAMILY Voltage-gated potassium channels 109 444 - -
Pte18g01025 711 Pfam Ion transport protein 118 441 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte18g01025 711 SUPERFAMILY cAMP-binding domain-like 450 637 IPR018490 -
Pte18g01025 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 96 677 - -
Pte18g01025 711 Gene3D - 147 447 - -
Pte18g01025 711 ProSiteProfiles cAMP/cGMP binding motif profile. 523 633 IPR000595 -
Pte18g01025 711 SMART cnmp_10 523 649 IPR000595 -
Pte18g01025 711 CDD CAP_ED 523 633 IPR000595 -
Pte18g01025 711 Gene3D Helix hairpin bin 449 514 - -
Pte18g01025 711 Pfam Cyclic nucleotide-binding domain 543 631 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01025 Pte-Chr18 22679391 22683312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01025 38 712 Ion Channels AT5G15410 76.788 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01025 K05391 - qsa:O6P43_009127 1171.76