Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00999 ATGATTAGAGATCTAACCGAAATTGATACTGTAAATAGAAAGGAAAGGCATGCAAATGATGAGAAAGCAAAGGCAGTAGCAAGTACATCAATACAACTGTCAAGATTAAAGGATGTGAGGATTGTCAGAGTATCACGAGGCTTTGGAGGAAAAGACAGACACAGCAAAGTTTGCACAGTGAGAGGATTGAGAGACAGAAGGGTGAGGCTATCAGTACCAACAGCTATTCAATTGTATGATCTTCAAGATAGGTTAGGGCTCAGCCAGCCTAGCAAAGTAGTTGATTGGTTGCTAAATGTAGCTAAGCATGACATTGATAAACTGCCACCACTGCCAATGCTTCCAGAAAACTTTGGCCTGAATAATTCATCTGGTGTAACCTCTGATCAGAACAGTAATCCTCCACTTAATGAAGGACGGTTGATCAACTCTAGTAAGAACCTAGTTTTAGAGGGTTCCAATGGATTAAATAGACAAAACACTTGGGGCTCAAGTACTCATTGGAGGTCAAACTCTAAACTAAACGGAGAAACAAACGTTACAAAGAAAGAAGATTGGACAAGTAATAGAGATGAAGAAGTGAGAAAAGAAAGTGGGGAATATTGTCATGGTGCAAGTGCACATGTCTCTTCAAGTATTCTTTCACAGAGACGAAATCATCCTCCATTGTTGGGTTTGCTGAATGGCATGCCATTAGGTTATCAATGGGAGCCTTCTAACCTTTCATTATCTCAATCAAGAAACCATGGTTTCGCATATCAAGCAGATGATCGAAGCTATAATGTTGATGTTGCTTCGCTGCCATCACCACTGTCTTTATCAACTGGCATGCCTCAAGTTTTTGCATGTTCACCTGGAGTAGCGCGATCCTATATCCCTGCACATGTTACATCTTCAATGGAGATTGATCCTAGAAATATCAACCAAGCTGTGCATGCAGGTCAGATGATAAGCACAAGCTCGCAGCAGCAGTTGTCATATTCATTCAACTCTCTTTTATATCCTATGAATCAACCTATGAAATCTATCACCTTGGGTATGGCGACCGATAACCCGTTCCAATCAGCATATAATAGGGACGGTCAATCACATGAAACTCGGGATTTTCCTTCCTAG 1116 0.4095 MIRDLTEIDTVNRKERHANDEKAKAVASTSIQLSRLKDVRIVRVSRGFGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNVAKHDIDKLPPLPMLPENFGLNNSSGVTSDQNSNPPLNEGRLINSSKNLVLEGSNGLNRQNTWGSSTHWRSNSKLNGETNVTKKEDWTSNRDEEVRKESGEYCHGASAHVSSSILSQRRNHPPLLGLLNGMPLGYQWEPSNLSLSQSRNHGFAYQADDRSYNVDVASLPSPLSLSTGMPQVFACSPGVARSYIPAHVTSSMEIDPRNINQAVHAGQMISTSSQQQLSYSFNSLLYPMNQPMKSITLGMATDNPFQSAYNRDGQSHETRDFPS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00999 371 MobiDBLite consensus disorder prediction 154 174 - -
Pte18g00999 371 ProSiteProfiles TCP domain profile. 50 108 IPR017887 -
Pte18g00999 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 299 IPR005333 GO:0003700
Pte18g00999 371 Pfam TCP family transcription factor 50 191 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00999 Pte-Chr18 22452953 22454068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00999 37 122 TCP Transcription Factor Family AT3G02150 80.233 1.94e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte18g00999 TCP 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00999 - - tcc:18601674 297.36