Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00995 ATGGCTACATCTGGTCCACGAGCGCAGTCGTTTGGTCAAACTGAGATTAACTGGGACAAGCTCGACAAAACAAAGTTTTATGTCATAGGAGCTGGAATCTTTACTGGGATAACTGTGGCACTCTACCCGGTTTCTGTTGTGAAAACTAGACTACAAGTAGCTTCAAAGGAAGCTGCTGAAAGAAATGCATTTTCTGTGATAAGAGGGTTACTTAGAACAGATGGTGTGCCGGGACTATATAGAGGCTTTGGTACTGTAATCACTGGGGCTGTTCCAGCTAGAATCGTTTTTCTCACTGCTTTAGAGACCACAAAGGTGTCTGCTTTTAAGATGCTCGAACCATTTACTCTATCAGAAACTACCCAGGCAGCCATAGCAAATGGAGTTGCCGGCATGACATCATCTCTCTTTGCTCAAGCTGTTTTTGTTCCTATTGATGTGATCAGCCAAAAGTTGATGGTGCAAGGATATTCGGGCTATGCAAGGTATGATGGGGGTCTGGATGTTGCTCGTAAAGTTATAAAATCAGATGGAGTCCGAGGATTGTATAGAGGGTTTGGACTATCTGTTATGACTTACTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGATTCATTTGGAGGCTCTTGGGACATGGTAGTGATAGCGAGGAAGCTGTCCCTCGGACCCAGAAAATTGTTTTAGTACAAGCTACCGGGGGGATAATTGCTGGTGCAACTGCATCTTGTATAACAACCCCGTTAGATACCATTAAGACACGCTTACAGGTATATCATGTATTTATCTCTTTCTCTCTTTCTGTTTTCGCTTTCCTTCTTGAAAAGAGTTAG 846 0.435 MATSGPRAQSFGQTEINWDKLDKTKFYVIGAGIFTGITVALYPVSVVKTRLQVASKEAAERNAFSVIRGLLRTDGVPGLYRGFGTVITGAVPARIVFLTALETTKVSAFKMLEPFTLSETTQAAIANGVAGMTSSLFAQAVFVPIDVISQKLMVQGYSGYARYDGGLDVARKVIKSDGVRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRLLGHGSDSEEAVPRTQKIVLVQATGGIIAGATASCITTPLDTIKTRLQVYHVFISFSLSVFAFLLEKS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00995 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 281 IPR018108 -
Pte18g00995 281 Gene3D Mitochondrial carrier domain 9 159 IPR023395 -
Pte18g00995 281 Gene3D Mitochondrial carrier domain 160 269 IPR023395 -
Pte18g00995 281 SUPERFAMILY Mitochondrial carrier 19 265 IPR023395 -
Pte18g00995 281 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Pte18g00995 281 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Pte18g00995 281 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Pte18g00995 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Pte18g00995 281 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Pte18g00995 281 Pfam Mitochondrial carrier protein 234 262 IPR018108 -
Pte18g00995 281 Pfam Mitochondrial carrier protein 32 107 IPR018108 -
Pte18g00995 281 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Pte18g00995 281 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00995 Pte-Chr18 22430422 22436049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00995 16 262 Chloroplast and Mitochondria Gene Families AT5G15640 79.839 1.42e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00995 K15121 - qsa:O6P43_009187 445.277