Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00994 ATGGAGTTTCGTTTCTCACCCATTACCAGATTGCCGTTCAAACTAAGTTGTGGCATTTTGCTTTTGGTTCTGTCACTCTGCTTCACTGTAACAGAAGCCTATGATCCACTGGACCCAACTGGAAACATCACAATCAAATGGGATGTCATAAGCTGGACTCCTGACGGATATGTTGCTACAGTTACACTTTACAACTTTCAGCAATACCGTCACATCCAAGCTCCTGGATGGTCGCTGAGCTGGACTTGGGCAAAGAAGGAAGTCATATGGACCATGATGGGAGGCCAGACCACTGAGCAAGGGGATTGTTCAAAATTCAAGGGCAATATTCCACATTGCTGTAAGAAGACCCCAACAGTTGTTGATTTGCTTCCTGGCACGCCTTACAACCAACAGGTAGCAAATTGCTGCAAAGGTGGCGTTCTCAGCTCATTTGGCCAGGACCCAGTCAATGCCGTGGCCTCATTTCAAGTAAGTGTTGGTCAAGCTGGAACAAGCAACAAAACTGTGAAACTACCTAGAAACTTCACCCTCAAAGCACCTGGTCCTGGTTATACTTGCGGGCCAGCAAAAATTGTTAAATCAAGTAAATTTCTGACTGCAGATAAGAGAAGAGCCACACAAGCCCTCATGACATGGAACGTTACGTGCATGTATTCACAATTCCTGGCTCAGAAAACTCCTACTTGCTGTGTTTCACTTTCATCCTTCTATAATGATACAATTGTATCCTGTCCATCGTGCGCATGTGGCTGCAAGGGAAACTTGCCTCAGCCTGAGAGCTGTGTGGAGGGAGATTCACAGTATCTGGCATCCGTCGTTCCTTCTTCTGGAAAGAGCAACTACGCACCGTTGGTTCAATGCACAAGTCATATGTGTCCTATTCGAGTCCACTGGCATGTTAAGGTTAACTACAAAGAATATTGGCGTGTCAAGGTCACTATCACTAACTTCAATCACAGAATGAACTATTCCGAGTGGAATTTAGTTGTCCAGCATCCTAATTTTGACAACTTAACCCAACTTTTCAGCTTCAACTACAAGTCATTAGCTCCTTATGCTCAGATCAATGATACTGCATTGCTGTGGGGGATTAAGTTCTACAACGATTTGCTCATGCAAGCTGGGCCTGCTGGTAATGTGCAATCTGAGTTACTCTTTCAGAAGGATAAGTCAACATTCACTTTTGACAAGGGCTGGGCTTTTCCTCGGAGGATCTATTTCAATGGTGATAACTGTGTCATGCCTCCACCAGACGCTTATCCATGGTTGCCAAATGATGGTTCCAGGCATCATGTCTCACTGTTGTCAGTGTTAACCATGACTCTAATTACGGCCATCTTTCTGAGTGCATAG 1356 0.4484 MEFRFSPITRLPFKLSCGILLLVLSLCFTVTEAYDPLDPTGNITIKWDVISWTPDGYVATVTLYNFQQYRHIQAPGWSLSWTWAKKEVIWTMMGGQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGTPYNQQVANCCKGGVLSSFGQDPVNAVASFQVSVGQAGTSNKTVKLPRNFTLKAPGPGYTCGPAKIVKSSKFLTADKRRATQALMTWNVTCMYSQFLAQKTPTCCVSLSSFYNDTIVSCPSCACGCKGNLPQPESCVEGDSQYLASVVPSSGKSNYAPLVQCTSHMCPIRVHWHVKVNYKEYWRVKVTITNFNHRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLAPYAQINDTALLWGIKFYNDLLMQAGPAGNVQSELLFQKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNDGSRHHVSLLSVLTMTLITAIFLSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00994 451 PIRSF COBRA 8 451 IPR006918 GO:0010215|GO:0016020
Pte18g00994 451 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0016020
Pte18g00994 451 PANTHER PROTEIN COBRA 22 441 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00994 Pte-Chr18 22425978 22429190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00994 1 449 COBRA Gene Family AT3G02210 73.556 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00994 - - qsu:112009790 776.548