Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00973 ATGATTACGTATAGTGACACAGCTCAGTGTCCAAATAAAAATAGGTGCTTTAATCCCTTTTATAACTTATATACCCCACAACAAGTTCAAGACTTTAGCCCACCCTCTTCATGTTTCAGCAGTACTTCAACTTCTGACGAAGCTGAAGAACAGCAACAGCAGCAAAGTCTCATCCATGAAAGGAAAAAGAGAAGGATGATATCCAACAGAGAGTCTGCACGCAGATCTCGTATGAGAAAGCAAATGCACCTTGATGAGCTGTGGTCGCAGGTTGTCTGGCTCAGGAATGAGAATTATCAACTTATAGATAAGCTTAACAATGTGACGGAGTCTCGTGAGAGAGTTGTTCAAGAGAATGCTCAGCTCAGAGAAGAAGCTACAGAGCTTCGTCAACTGCTCAGTGACATGCAACTGCGCAGTCCTTTCTCTACCTTCAGACAACTTGAAGATGATGACTGCAACACAGATTTTCTATGCACAGCTGACGATTCCCCAAACCCTTCAATCACAAATTCCAGTGATCTCCTTTGCTGA 534 0.4288 MITYSDTAQCPNKNRCFNPFYNLYTPQQVQDFSPPSSCFSSTSTSDEAEEQQQQQSLIHERKKRRMISNRESARRSRMRKQMHLDELWSQVVWLRNENYQLIDKLNNVTESRERVVQENAQLREEATELRQLLSDMQLRSPFSTFRQLEDDDCNTDFLCTADDSPNPSITNSSDLLC* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00973 177 Pfam bZIP transcription factor 61 115 IPR004827 GO:0003700|GO:0006355
Pte18g00973 177 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Pte18g00973 177 FunFam BZIP transcription factor 59 110 - -
Pte18g00973 177 CDD bZIP_plant_GBF1 62 110 IPR045314 GO:0003700|GO:0006355
Pte18g00973 177 MobiDBLite consensus disorder prediction 32 52 - -
Pte18g00973 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Pte18g00973 177 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 11 143 IPR044521 -
Pte18g00973 177 SUPERFAMILY Leucine zipper domain 61 110 IPR046347 GO:0003700|GO:0006355
Pte18g00973 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Pte18g00973 177 MobiDBLite consensus disorder prediction 53 78 - -
Pte18g00973 177 Coils Coil 105 139 - -
Pte18g00973 177 Gene3D - 59 113 - -
Pte18g00973 177 MobiDBLite consensus disorder prediction 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00973 Pte-Chr18 22215215 22215748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00973 18 146 bZIP Transcription Factor Family AT3G30530 65.891 7.25e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte18g00973 bZIP_1 9.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00973 - - cpap:110813039 200.675