Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00947 ATGATGGACAAGATGCAGCATTCCCAAGGCCTTGACGACTTCCCAGTCACCTCACAGGTAAGAGGCAATGGTTTCAGTTATCCATCCAACCAAGCACAATATTTCTGGGAGTGGCGAAAGCATCCAAGAATAAGCTCCATCCGCAAGTCAATAAGAAGCAGCATTGCTGCAATTTTAGGTTCTTCCAAAAGGTTTGAGCAAGCTCAGAATGCACTTGATCTTGTGACTGTATTGGAAAACCAGCTGTTCATTAATGCCGTTTCAGAGGAAGCTTATGCAGACCACGAAACATTGATGGACCGGTTGCATAGTGCACTCCAACCTAAATCTGCTGATACAAAAGGCAGTGTGCAAATAGAGAACAATGGAACTTCTGTTATAGTAAAGCCATCTCCAGTACTGTTGCCTAATTACTGCAATGGAGTTGCACCACAGCTCCCTTTTCTTTACTCGGAAGATACTTACAGTGCTTCTTTTGGGGATAACTTTGTGCCTGAAAAGAGCACTTACCTATCTGGGATTTCAAAAGGTCATCCATTTTGCACCTCCATTGTTGGCATGGTGAATAATGTAAACAATCCTTTTTGTACGCAAGCTCCTGCAAGTTTAATCTCTAAAGAAGACAAGTACAGTAGTGCTGAATCTTCAATCTCCTCCATGCCCAAGCCGTTGAAGCGAATTCCTAGTGACACTGTTCTATCTCTTGGGGAGACTTCAACCATCACTACATACTCAGATGGGGATGGCTTCTCCAATGGTGTCACTTTTTCTAGTCCCCCAAACCTGGAAAATAGCTCTGGTTCTTCATTTTGTTATCAATTTGAACAGCAAAATCTGGATGCTGGAACTGGCCAGGAAAATGAGTCTGTGGCTTTAACATCTACAGTGGGGGAACATAAGCAATCTTCGCTTTCAAATTTGGTAAGACCTAAACTTGTGGCTGAGGTGGTGCCGCATGTTTCCAACAATCTCAACATCTGCAGCAAGAGTCCAAGTTATCCAGCTTTGCCTGTAAGTCAATCACATAGCTTTCAGTTTCAGCAGGACATTGAGCAATCTGAGGTATATTCCCACATGACAAGTTTGTGCTTTTATGGCGAAACCAGATCTGGATCGAATGTGATTAAGTTACCCAAGTATTCTTTCGGGCAGTCAAATTCAGATCAGAGGTTTGCATGTTTCTCATTTATTTCTGGTTTAGATGGAGCTGCTCAGGCGAATAGGAGTGATGCATCTAATATTTCTGATGAGCAGAAGATATTGCGTGCTTATTGGAACTACAAGAGTCTAACACTGTCTGCAGGGAATGGTCAGGTTTCGTTTGTCAAATATCTGCATTCAACAGTGTGCAAACACGGGACATGTTTTTGTACACAGTACTCCTTGCTGTCATCACATTTTGGTGACTGCGACGACACTGATTGCTATATTTGCTGGCCTTTGAAGTTGCTTTGTGATCCTCCTATCATGCAGCCAATTTTAGATATTAGTAATGATTATACAGCAGATTTCTGTAAAGAAGTTTATGGAGGACTTGATATGGGAGATTCAAAATACATGCAACAGCCTAGAAAGAGATTGAAGAAGGAGATTGCTTATGGAGTCAATGCAAATGAAAGCAGTGCTTCTCAACCATCAGTTCCAATAACAGTGCAGCCTCCTTCTCCTCAACGGCTTTCTGGCTCGCACAAACAGCCCAAATCTTTGTTATCTATCCATATTGAATCACAAGATGACATGGCATTATTCACAAAGCCAGTACCAGACTCCACCAACATTAATGTGATAAAATGCAGCCGAGATAATAACATTGAAAAGTTCACTGTTGGGAGTGAGCTATTACTTCCTCAAGGCTCAGAAGTTAAGGTAGAGGATATAAATCGAAATGGCAAAAGGTGTTTTGCAGATAGTGTTAGTGGAAATCCCAACCAATTAGATCTAAGCATTTCTGTTTGCACTATAATTTCAAGTCCTGCACAAGCAGAGGACACGTTGGTGAAACCCAATTTTAGTACAACTAGGTCAGAGAATGTCAAGAGTCCTCCAGAAGCTGACAATATAGTAGTTGTTTCCTTAATTGAATTCTTTACAGCTGAGAGAATAAGGGAGCACATAAGGAGTCTGAAGCAGCGGAATGAACATGAAAGAAATCCAGAAGAAAAGGGATTTACTCTTAATTTGTGCCAACTATGCGGATTGGATAAACTTCTTTTGACACCAGTTCCCATTTATTGTTCATTTTGTGGTGCTCGTATCAAGCGTAGAGGGCAGTATTACTGTAAAGAAGATTTTGAGACCCAATATTGCTTTTGCATCTCTTGCTTTCGGCAATCTCGAGGTGTTTCAATCAATTTCAACGGAATCTCTGTTGCCAAGGCCATGCTTCACAGGAAGAGGAATGATGAAGAAACTGAAGAATCTTGGGTTCAGTGTGATAGATGTGAAGAATGGCAACATCAAATATGTTCTCTGTATAATGATCAACGAGATTTGGAGGGAAAAGCTTCGTATGTCTGTCCCAAATGTTGCTTAGAAGAGATAGAAAATCAAAAGCGTGTGCCCCTATCTAAGAAATATGCTTTTTGCGCAAAAGACTTGCCAAAGACTCCACTTAGTGACCACATAGAGCAAAGACTAGCAAAACGTTTACAGGAAGAGAGAGAAGACAGGGCAAATGTTGAGGGAAAGAAGGTTAGTGAGGTGTTAGGAGCTGAAGATCTTACAGTCAGGGTGGCACTTTCTGTGGTAAAACAATTAAAAGTGAAGCAACAGTTTCTGGATATTTTTCCTGGGAAAAATTACCCTACTGAATTCTCTTACAGGTCAAAGGTAGTGCTTTTATTTCAAAAAATTGAGGGAGTGGATGTTTGTCTCTTTGGATTGTATGTACAAGAGTTTGGCTCTGAATGTAGACAACCAAATCAACGTTGTGTTTATATCTCGTATCTGGATTCGGTGAAGTACTTTAGGCCTGATATAAAAACTTCTTCTGGGGAGGCTTTACGGACCTTTGTCTACCACGAAATACTGATTGGGTATCTCGAATTTTGCAAGAAGCAGGGTTTCACAACATGCTACCTTTGGGCATGCCCTCCTCTGAAAGGAGAAGATTACATATTGTATTGCCATCCTGAGACACAGAGAACGCCAAAGTCCGAGAAGCTGCGACAATGGTACCAGGTAATGCTAGGGAAAGCTTCTGAAGAGAACATTGTTGTTGGTGTATCTAACATATATGATGAATTCTTTGTTCCGACCGGAGATTCCAACGGTAAGATAACAGCTTCTCGTCTACCATATTTTGATGGAGACTATTGGTCTGGCGCTGCACTGGATTTGATGCGGAACATAGAACAGAAGAATGGAGGGGACTATCAGAGGGAATTAAAAAAGATAATGACAAAAAGAGCCTTGAAGACTATGGGACACACAAATCCTTCTGATGTGACTGCCAAAGACATTCTACTGATGCAAAAGCTCGGACAAAGTATATTACCTGTCAAAGAGGATTTCATGATAGTCCATCTACAGTTTGTTTGCATGCAATGCCGTGAAGTGATATTATCCGGGAGACGGTGGTTTTGCAGACAGTGCAAAAACTACCAGCTTTGTGATAGATGCCATGCATCTGATCACGAGCTTGGTCAGAAAGACACTCACACTGCACATGGCGGAGAAGTACATATGCTCTCTCAGGTTACCGTTTATGATATTCCTTTCCATGCAAATGAAAAAGATGTTACCATAGACAACAGTTTATTTGAGAATAGGCATACTTTCTTGAGCTTCTGCCAGAGGAAGCATTTTCAGTTTGACACACTACGCCGAGCCAAGCATTCTTCAATGATGATCCTGCACCATCTGAGGAACACATCTGTGTTGGCTATTGAGAGAATGTGTAGCATTTGCTGTCAAGGTACGGTGGTTCAGCAAAGCTGGTCATGTAAGATATGCACAGACTTCATAATTTGCGAAGCATGTTACAAATTGAAAGGTGCACAGTGTCACGTGCATCAGTTGATTCAATCATCTCCGGCAAGTAAAACTATGACAGGGAGGGAAGAGCCTCACCAGAATGCATTAATGACAAGGCGATTGCTGGATGTTATACAGCATGCCTCTCAATGTCGATCATCGAAGGATCAGCCATGCACATATCCTTATTGTGTTCAAATTAAAAAACTGTTTGGCCATGCCAATAGATGTACTATTCGGGCTTCTGGGGGTTGCCAACATTGCAAGAAAGCATGGTTGGGGCTAAGCATGCACTCGAGACACTGTAGAGAATCTGATTGCCGGATACCACGCTGCATGGACCTGAAGAGGCATGCGGAATGGTTAGCTTCACAGTCCGATGTACGGCGTAGGGCTGCAATTTTGGAACTAAGCAGGTAG 4395 0.4191 MMDKMQHSQGLDDFPVTSQVRGNGFSYPSNQAQYFWEWRKHPRISSIRKSIRSSIAAILGSSKRFEQAQNALDLVTVLENQLFINAVSEEAYADHETLMDRLHSALQPKSADTKGSVQIENNGTSVIVKPSPVLLPNYCNGVAPQLPFLYSEDTYSASFGDNFVPEKSTYLSGISKGHPFCTSIVGMVNNVNNPFCTQAPASLISKEDKYSSAESSISSMPKPLKRIPSDTVLSLGETSTITTYSDGDGFSNGVTFSSPPNLENSSGSSFCYQFEQQNLDAGTGQENESVALTSTVGEHKQSSLSNLVRPKLVAEVVPHVSNNLNICSKSPSYPALPVSQSHSFQFQQDIEQSEVYSHMTSLCFYGETRSGSNVIKLPKYSFGQSNSDQRFACFSFISGLDGAAQANRSDASNISDEQKILRAYWNYKSLTLSAGNGQVSFVKYLHSTVCKHGTCFCTQYSLLSSHFGDCDDTDCYICWPLKLLCDPPIMQPILDISNDYTADFCKEVYGGLDMGDSKYMQQPRKRLKKEIAYGVNANESSASQPSVPITVQPPSPQRLSGSHKQPKSLLSIHIESQDDMALFTKPVPDSTNINVIKCSRDNNIEKFTVGSELLLPQGSEVKVEDINRNGKRCFADSVSGNPNQLDLSISVCTIISSPAQAEDTLVKPNFSTTRSENVKSPPEADNIVVVSLIEFFTAERIREHIRSLKQRNEHERNPEEKGFTLNLCQLCGLDKLLLTPVPIYCSFCGARIKRRGQYYCKEDFETQYCFCISCFRQSRGVSINFNGISVAKAMLHRKRNDEETEESWVQCDRCEEWQHQICSLYNDQRDLEGKASYVCPKCCLEEIENQKRVPLSKKYAFCAKDLPKTPLSDHIEQRLAKRLQEEREDRANVEGKKVSEVLGAEDLTVRVALSVVKQLKVKQQFLDIFPGKNYPTEFSYRSKVVLLFQKIEGVDVCLFGLYVQEFGSECRQPNQRCVYISYLDSVKYFRPDIKTSSGEALRTFVYHEILIGYLEFCKKQGFTTCYLWACPPLKGEDYILYCHPETQRTPKSEKLRQWYQVMLGKASEENIVVGVSNIYDEFFVPTGDSNGKITASRLPYFDGDYWSGAALDLMRNIEQKNGGDYQRELKKIMTKRALKTMGHTNPSDVTAKDILLMQKLGQSILPVKEDFMIVHLQFVCMQCREVILSGRRWFCRQCKNYQLCDRCHASDHELGQKDTHTAHGGEVHMLSQVTVYDIPFHANEKDVTIDNSLFENRHTFLSFCQRKHFQFDTLRRAKHSSMMILHHLRNTSVLAIERMCSICCQGTVVQQSWSCKICTDFIICEACYKLKGAQCHVHQLIQSSPASKTMTGREEPHQNALMTRRLLDVIQHASQCRSSKDQPCTYPYCVQIKKLFGHANRCTIRASGGCQHCKKAWLGLSMHSRHCRESDCRIPRCMDLKRHAEWLASQSDVRRRAAILELSR* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00947 1464 Gene3D TAZ domain 1351 1463 IPR035898 -
Pte18g00947 1464 ProSiteProfiles Zinc finger PHD-type profile. 768 845 IPR019787 -
Pte18g00947 1464 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 860 1293 IPR031162 GO:0004402
Pte18g00947 1464 CDD PHD_HAC_like 770 842 - -
Pte18g00947 1464 Coils Coil 876 896 - -
Pte18g00947 1464 SUPERFAMILY FYVE/PHD zinc finger 804 845 IPR011011 -
Pte18g00947 1464 ProSitePatterns Zinc finger ZZ-type signature. 1180 1207 IPR000433 GO:0008270
Pte18g00947 1464 Pfam TAZ zinc finger 1365 1437 IPR000197 -
Pte18g00947 1464 SMART zz_5 1174 1218 IPR000433 GO:0008270
Pte18g00947 1464 Pfam Zinc finger, ZZ type 1175 1212 IPR000433 GO:0008270
Pte18g00947 1464 MobiDBLite consensus disorder prediction 539 563 - -
Pte18g00947 1464 ProSiteProfiles Zinc finger TAZ-type profile. 1355 1440 IPR000197 -
Pte18g00947 1464 SUPERFAMILY RING/U-box 1276 1341 - -
Pte18g00947 1464 SUPERFAMILY RING/U-box 1155 1216 - -
Pte18g00947 1464 ProSitePatterns Zinc finger PHD-type signature. 769 842 IPR019786 -
Pte18g00947 1464 SMART PHD_3 770 843 IPR001965 -
Pte18g00947 1464 Gene3D - 1171 1224 IPR043145 -
Pte18g00947 1464 ProSitePatterns Zinc finger ZZ-type signature. 1300 1327 IPR000433 GO:0008270
Pte18g00947 1464 Pfam Histone acetylation protein 904 1116 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte18g00947 1464 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 795 843 IPR013083 -
Pte18g00947 1464 ProSiteProfiles Zinc finger ZZ-type profile. 1175 1234 IPR000433 GO:0008270
Pte18g00947 1464 SUPERFAMILY TAZ domain 1361 1442 IPR035898 -
Pte18g00947 1464 SMART TAZ_2 1357 1438 IPR000197 -
Pte18g00947 1464 SMART KAT11_2 893 1187 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pte18g00947 1464 PANTHER CBP/P300-RELATED 73 1461 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00947 Pte-Chr18 22001443 22011933 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pte18g00947 HAT_KAT11 1.3e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00947 K04498 - qsa:O6P43_009258 1262.67