Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00943 ATGTTCACTGCAAGGAAGAAAATTCACAAGGACAAGGATGCTGAACCAACTGAATTTGAGGAGACTGTTGCACAGTACCTTTTTGACTTGGAAAACACCAACCAGGAGCTAAAAAGTGACTTGAAAGACCTATATGTAAACTCAGCAGTTCAAATTGATGTTGCTAGCAATCGCAAGGCTGTTGTTATATATGTGCCCTATAGATTGAGAAAGGCATTTCGTAAAATTCATCTTCGCCTTGTCAGGGAATTGGAGAAAAAGTTCAGCGGAAAGGATGTTATCATAATTGCAACTCGGAGAATAGTTCGTCCTCCAAAGAAAGGTTCTGCAGTTCAGAGGCCGCGTACTCGTACCTTAACTGCTGTACATGATGCTATTCTAGAGGATGTGGTGCATCCTGCTGAGATTGTTGGCAAGCGCATCAGATATCGAATTGATGGATCAAAAATTACAAAGGTGTTCTTGGATCCAAAGGAGCGCAACAACACTGAGTATAAGCTGGAAACTTTCTCCGGTGTTTACAGGAAGATTACTGGGAAGGATGTGGTATTTGAATACCCAATCACCGAGTAG 573 0.4188 MFTARKKIHKDKDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYVNSAVQIDVASNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVIIIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVHPAEIVGKRIRYRIDGSKITKVFLDPKERNNTEYKLETFSGVYRKITGKDVVFEYPITE* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00943 190 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte18g00943 190 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pte18g00943 190 Coils Coil 27 47 - -
Pte18g00943 190 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00943 Pte-Chr18 21974480 21976589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00943 1 190 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.421 3.86e-112 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00943 K02993 - qsa:O6P43_009291 358.221