Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00939 ATGGCCACGGAAGCTACAGCGAAGTTCCAAAATCCCAACTTCCGCGCAGTTCCGCAGCCCCCAGATTACCATCCAGAGATAACTGTTTCTGCGCACGACGGTCTTCACTTTTGGCAGTTTATGGTTGCTGGTTCAATTGCAGGTTGCATCGAGCACATGGCTATGTTCCCTGTTGACACTGTGAAGACCCATATGCAAGCTCTTGGATCGTGTCCCATTAAGTCAGCTGGTGTTCGACAAGCTCTTCGGTCGATTTTGAAAACTGAAGGGCCGTCTGGGTTGTACCGTGGCATAGCAGCCATGGGACTAGGCGCTGGACCAGCTCATGCTGTGTATTTTTCTGTCTATGAGATGTTTAAGAAGTTCTTGTCTGGTGGGAATCCTAATAACTCTGCAGCGCATGCTGTTTCTGGTGTATTTGCTACTATAGCTAGTGATGCCGTGTTTACACCCATGGATATGGTGAAGCAGAGATTGCAATTATCTAATAGTCATTACAAGGGTGTATGGGACTGTGTAAAGACGGTGTTGAGGGAAGAAGGCTTCAAAGCTTTCTATGCGTCTTATAGGACGACAGTTTTGATGAATGCGCCTTTTACTGCCGTGCATTTTGCGACCTATGAAGCTGCTAAGAAGTGTTTAATGGAGTTGTCTCCTGAGCATGCAGATGATGAAAGATTAATTGTTCATGCTACTGCTGGAGCTGCCGCTGGGGCTCTAGCTGCTTCTGTCACTACGCCTCTTGATGTGGTTAAAACTCAATTGCAATGTCAGGGTGTCTGTGGATGTGACAGATTCAAAAGCAATTCAATTGGCCATGTGATTCAAAGGATAGTTAAAAAGGATGGGTACAGAGGGCTTGTGAGGGGTTGGATTCCACGGATGCTATTCCATGCCCCTGCTGCTGCAATCTGCTGGTCCACCTATGAATCAGGGAAGAGCTTTTTCAAGAATTGA 957 0.4681 MATEATAKFQNPNFRAVPQPPDYHPEITVSAHDGLHFWQFMVAGSIAGCIEHMAMFPVDTVKTHMQALGSCPIKSAGVRQALRSILKTEGPSGLYRGIAAMGLGAGPAHAVYFSVYEMFKKFLSGGNPNNSAAHAVSGVFATIASDAVFTPMDMVKQRLQLSNSHYKGVWDCVKTVLREEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKKCLMELSPEHADDERLIVHATAGAAAGALAASVTTPLDVVKTQLQCQGVCGCDRFKSNSIGHVIQRIVKKDGYRGLVRGWIPRMLFHAPAAAICWSTYESGKSFFKN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00939 318 Gene3D Mitochondrial carrier domain 14 224 IPR023395 -
Pte18g00939 318 FunFam Mitochondrial substrate carrier family protein 22 217 - -
Pte18g00939 318 PANTHER MITOFERRIN-1-RELATED 32 317 - -
Pte18g00939 318 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Pte18g00939 318 Pfam Mitochondrial carrier protein 226 317 IPR018108 -
Pte18g00939 318 Pfam Mitochondrial carrier protein 35 124 IPR018108 -
Pte18g00939 318 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Pte18g00939 318 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Pte18g00939 318 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Pte18g00939 318 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Pte18g00939 318 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Pte18g00939 318 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Pte18g00939 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Pte18g00939 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Pte18g00939 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00939 Pte-Chr18 21935489 21938405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00939 1 318 Chloroplast and Mitochondria Gene Families AT2G30160 77.399 0.0 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00939 K15113 - cave:132178554 552.362