Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00932 ATGCTCATCTTATACGTGACCATCTTCTCTTCCTCTTTCCACCTTCTCCATATTGCAACCACCATTCTCGTTTTCAAAGTTTTATCTCTGTCAAAGCTCTCTAACTGTTGTTTGTGTTTTATGGCGATGGGCTCTTCTTCTGGCAGCTTAGACACTTCTGCAAATTCTCATCCAAGTTTCAGTTTCTCTACTCATCCTTTCGTGACTGCTTCTTTCTCTGATCTTCTGGCTTCACCTGTTGAACAAAACCCCGCTGGTATAGATAACAGGCAACAACGGCGCGGTGGTGGGTTGGGTGATCGTATAGCAGAGAGGACTGGTTCTGGTGTTCCCAAGTTCAAGTCAATCCCACCATCCTCTTTGCCTATCTCTCCTCCTTCCTTATCTCCTTCTTCATATTTTGCTATCCCAGCTGGGTTGAGTCCAGCTGACCTTTTGGACTCACCAGTCCTTCTTAACTCTTCTAACATTCTGCCATCTCCAACTACTGGAGCATTTACTGCACAGTCCTTCAATTGGAGAAGCGGCAATTCTGGTGATAACCGGCAGAATATTAAGCAAGAAGATAGAGGCTTCTCAAGTTTCTCTTTTCAACCTCAACCTAGACCACCACCGCCTCCTTCGTCAACAGCTATGTTTCAATCTTCAGTCAACGCAAACCAAACTACACACCAACAGGCATGGAGTTTTCAAGAGGCAGCCAAGCAAACCAGTCTTCCCTCAGGGAAGAGTATTGTCAAATCAGAAAATCCTTCCGGGCAGAGTTTTCCCCCTGAGATTGCTACCAACAATACACAAAACAACAACGGTGGGATCCAATCAGAATTCAGCAATTACCATCACCAACAGCCTCAAGTTTTAAGCAGAAGGTCTGATGATGGTTACAATTGGAGAAAATATGGACAGAAACAAGTTAAAGGAAGTGAAAATCCAAGGAGTTATTACAAGTGCACATACCCCAGTTGCCCAACGAAGAAGAAGGTTGAGAGGTCTTTAGATGGGCAGATTACCGAGATAGTTTACAAGGGTACTCATAACCATCCTAAACCTCAGTCCACCAGAAGATCCTCTTCCAATTCCACTTCTCTGCAAATGATACACTCAAACCCTTGTAGCAATGAAATCCCAGATCAATCGTTTGTTACTCATGGTTCTGGACAAATAGATTCTGTTGCAACACCTGATAATTCATCGATATCCATAGGAGATGATGAATTTGAGTCTCAAAGAAGTAAATCAGCAGGTGATGAATTTGATGAGGATGAACCTGATGTCAAAAGATGGTTAGTTTTTAATTGTTAA 1302 0.4293 MLILYVTIFSSSFHLLHIATTILVFKVLSLSKLSNCCLCFMAMGSSSGSLDTSANSHPSFSFSTHPFVTASFSDLLASPVEQNPAGIDNRQQRRGGGLGDRIAERTGSGVPKFKSIPPSSLPISPPSLSPSSYFAIPAGLSPADLLDSPVLLNSSNILPSPTTGAFTAQSFNWRSGNSGDNRQNIKQEDRGFSSFSFQPQPRPPPPPSSTAMFQSSVNANQTTHQQAWSFQEAAKQTSLPSGKSIVKSENPSGQSFPPEIATNNTQNNNGGIQSEFSNYHHQQPQVLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQSTRRSSSNSTSLQMIHSNPCSNEIPDQSFVTHGSGQIDSVATPDNSSISIGDDEFESQRSKSAGDEFDEDEPDVKRWLVFNC* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00932 433 Gene3D WRKY domain 278 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00932 433 Pfam WRKY DNA -binding domain 292 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00932 433 ProSiteProfiles WRKY domain profile. 292 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00932 433 MobiDBLite consensus disorder prediction 341 422 - -
Pte18g00932 433 MobiDBLite consensus disorder prediction 82 123 - -
Pte18g00932 433 MobiDBLite consensus disorder prediction 405 422 - -
Pte18g00932 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 427 IPR044810 GO:0003700
Pte18g00932 433 MobiDBLite consensus disorder prediction 232 290 - -
Pte18g00932 433 MobiDBLite consensus disorder prediction 232 295 - -
Pte18g00932 433 SUPERFAMILY WRKY DNA-binding domain 290 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00932 433 FunFam WRKY transcription factor 281 351 - -
Pte18g00932 433 SMART WRKY_cls 291 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00932 433 MobiDBLite consensus disorder prediction 346 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00932 Pte-Chr18 21823778 21825395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00932 289 428 WRKY Transcription Factor Family AT2G38470 58.108 5.73e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00932 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00932 K13424 - qsa:O6P43_014117 477.248