Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00931 ATGGCGTGTAGGAGTTACTACAAGTGCACATATCCAGGATGTCCTGTGAGAAAACATGTGGAGAGAGCATCACACGACTTAAGAGCTGTGATCACAACTTATGAAGGAAAGCACAATCACGATGTGCCTGCAGCTCGTGGTAGTGGCAGCCATTCAGTCAATAGACCCATACCCAACAATAGCAATAATACCAGCAATCCCAATAACAATGGCGACATCAATACAGCCGCCACAATAAGGCCTATTTCCATTGCCTATCACACTAACAATTCAGTCAGGAACCCAGTTCAGAATTACAGGCCAACGACAACATCAGAAGGGCAATCAGCCTTTGGACTTGATATGTTGCAAAGCCCCGGGAGCTTTGGATTCTCAGGGTTTGGGAATCAAATAGTTTCTTACACAAACCAGCAATCAGACAATGCATTCCCCCGAGCTAAAGATGAACCAAGGGATGACATGTTCCTTGAATCTTTGCTATGCTAA 486 0.4486 MACRSYYKCTYPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPIPNNSNNTSNPNNNGDINTAATIRPISIAYHTNNSVRNPVQNYRPTTTSEGQSAFGLDMLQSPGSFGFSGFGNQIVSYTNQQSDNAFPRAKDEPRDDMFLESLLC* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00931 161 Gene3D WRKY domain 1 44 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00931 161 Pfam WRKY DNA -binding domain 4 41 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00931 161 SUPERFAMILY WRKY DNA-binding domain 3 43 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00931 161 MobiDBLite consensus disorder prediction 34 71 - -
Pte18g00931 161 SMART WRKY_cls 4 42 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00931 161 MobiDBLite consensus disorder prediction 52 71 - -
Pte18g00931 161 ProSiteProfiles WRKY domain profile. 4 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00931 161 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 68 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00931 Pte-Chr18 21822737 21823222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00931 4 43 WRKY Transcription Factor Family AT2G38470 54.762 8.74e-08 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00931 WRKY 3.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00931 K13424 - qsa:O6P43_014117 206.453