Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00926 ATGCCTTCAAGGACTACTCTTCAATGGTTAAGTCTTGTGGGCATCATATGGCTTCAAGCCATAAATGGCACCAACACCGATTTTCCAGCTTACTCATCCCAACTCAAGGACCTCCTCTCTATGTCTCAAGTGCAACTTAACAACCTTGCCTTTGCCTCTGATGCTGGAAAACTTTTTGGTTGGTTTTCTGGTGTTGCTGCCATCTACCTTCCCCTTTGGCTAGTTCTCATCATAGGTTCAACTCTTGGCTTGATCGGTTATGGTATGCAATACCTCTTTGTCACAAACCAGATCGCTACCCTATCCTACTGGCAAGTCTTCTTCCTCACAGTCCTATCAGGTAATGGCATTTGTTGGATCAACACTGTCTGCTATGTTGTTGCCATAAGAAACTTCCCTTTTGAAAGTCAAGTTGCTGTTGGCTTGACAACCAGTTATCAAGGACTAACTGCAAAGCTTTATACAAATATTGTGGAAGCTATTTCTCCAAGGAAAAAAGCACAAGCTTTCCTCCTTCTAAACTCAGTCATACCTGTGATTGCTTGCCTTGTTACTGCACCATGTGTTAGAGACATCCAAGTTGGAAGGACTGGAAATACCAGTGTGGGGTTTATTGTAATGTTTGTTATTACAATCATCACAGGAACCTATGCCGTGTTCAGCAGTTTACGGTTCCCATCATTCAAGATATCTCCACTCAGTAATCTGATCGGTATTTTGGTGTCCCTCCTCCTACCTCTAGTGATTCCATTAGCTTATATAATCGTGAGAGTTGCTAGAAAATGGTACGGAGTTAGAGAAACCAAAGTTCATCATATTATTGAGGACAACGTTGTTAGCTCAGAAGGAACTGAAAATGGTGTAACAGGAGACTATTCTGCTACAGCAATGGAGAACGGTGTCGCAGAAAGAAATGAGGATGATGGTAAGGAAGTAGAAGAAGCTTTGGAGTTTCGTGAGATTGTTGTTAAAGAAGAGATTGGTGTGAAGGTGATGATGTGCAGACTAGATTTCTGGCTATATTTCTTTGTATATTTATTAGGTGCATCAATTGGTTTGGTGTTCTTGAACAACTTGGGACAGATAGCTGAATCTCGAGAGTTTTCTAGTACTACATCTTTGGTCTCTGTGTCTTCATCGTTTGGATTCTTCGGTCGCCTCATGCCAGCATTCGGGGACTACTACTTCTCAAGGAAAAAGAATGTGATTTCAAGAACAGGTTCTGTAATTCTACTAATGGCTCCAATGTCAGGAGCCTTCTTCTTACTTATCAACGAAACAAACTTTGCCTTATTCGTCAGCACAGCCATTATAGGTGTGTGTACAGGTGCAATCACGTCCATAGCTGTATCAATCACTACTGAGCTCTTTGGAACTAAGAACTTCTCAGTTAATCACAATGTGGTAGTGGCCAATATACCTATTGGTTCCTTTGCTTTTGGTTTCATGGCTGCTCTTCTATACCATAAAGAAGGCGATGGAAATGGGAAGTGTTTAGGAATGGAATGCTACAGAGACACTTTTATTATCTGGGGCTGTCTGTGTATTCTGGGGACTTTCCTAGCTTCGATTCTCTATTTTCGTACAAGGAAATTTTACTCACAGATGAGACAATAG 1617 0.4137 MPSRTTLQWLSLVGIIWLQAINGTNTDFPAYSSQLKDLLSMSQVQLNNLAFASDAGKLFGWFSGVAAIYLPLWLVLIIGSTLGLIGYGMQYLFVTNQIATLSYWQVFFLTVLSGNGICWINTVCYVVAIRNFPFESQVAVGLTTSYQGLTAKLYTNIVEAISPRKKAQAFLLLNSVIPVIACLVTAPCVRDIQVGRTGNTSVGFIVMFVITIITGTYAVFSSLRFPSFKISPLSNLIGILVSLLLPLVIPLAYIIVRVARKWYGVRETKVHHIIEDNVVSSEGTENGVTGDYSATAMENGVAERNEDDGKEVEEALEFREIVVKEEIGVKVMMCRLDFWLYFFVYLLGASIGLVFLNNLGQIAESREFSSTTSLVSVSSSFGFFGRLMPAFGDYYFSRKKNVISRTGSVILLMAPMSGAFFLLINETNFALFVSTAIIGVCTGAITSIAVSITTELFGTKNFSVNHNVVVANIPIGSFAFGFMAALLYHKEGDGNGKCLGMECYRDTFIIWGCLCILGTFLASILYFRTRKFYSQMRQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00926 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 534 - -
Pte18g00926 538 Gene3D MFS general substrate transporter like domains 304 531 IPR036259 -
Pte18g00926 538 Pfam Nodulin-like 8 250 IPR010658 -
Pte18g00926 538 SUPERFAMILY MFS general substrate transporter 7 191 IPR036259 -
Pte18g00926 538 SUPERFAMILY MFS general substrate transporter 208 531 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00926 Pte-Chr18 21744884 21746865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00926 3 535 Nodulin-like Gene Family AT2G30300 47.059 1.51e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00926 - - cave:132164087 676.011