Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00923 ATGGCTATGGAGAGATTGCATGAGATAGTGAAAAAGAGAAGAGAGTTAGAGAGTACTACAACTTCTCCAATGGGAAGAAGATATATATATGGTCCAGCATCATCTGGATCAACCTTGAATACTATTACTCCATGTGCTGCCTGTAAACTCCTGAGAAGAAGATGTGCAGAGGAATGCCCTTTCTCTCCATTTTTCTCACCCCATGAACCGCAGAAATTTGCTGCTGTCCACAAAGTCTTTGGCGCAAGCAATGTCTCAAAGTTGCTAATGGAGGTTCCAGAGAGCCAAAGGGCTGATGCAGCAAATAGTCTTGTCTATGAAGCCAACTTGAGGTTGAGGGATCCAGTCTATGGATGCATGGGTGCCATATCTGCTTTACAACAACAGGTTCAATCTCTTCAAGCTGAAGTAAATACAGTAAGGGCTGAAATTTTGAGATACAAATATAGAGAGGTCTATAGAGAGGCTGCTGCTACTGGTCACAATATGATTTCATCTGGGGAAGACACGATTCTTGTACAGCCACAGCAAGCTATTCCTCAACAACAGCCACCACCCCCACCTTCAACTCCTAAAAACTTACCTCCCCCTTCCATTGTGCTCCCAACACTGTCTTCATCCGCTATATCTTCCGTATACTCACCTGCTAGCAGTACTACAGCAGATCCGGTACCAAACCCAAATAACGACAGCATTCCATATTTTGTTTAG 711 0.4388 MAMERLHEIVKKRRELESTTTSPMGRRYIYGPASSGSTLNTITPCAACKLLRRRCAEECPFSPFFSPHEPQKFAAVHKVFGASNVSKLLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAEVNTVRAEILRYKYREVYREAAATGHNMISSGEDTILVQPQQAIPQQQPPPPPSTPKNLPPPSIVLPTLSSSAISSVYSPASSTTADPVPNPNNDSIPYFV* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00923 236 MobiDBLite consensus disorder prediction 199 227 - -
Pte18g00923 236 Coils Coil 123 143 - -
Pte18g00923 236 MobiDBLite consensus disorder prediction 177 236 - -
Pte18g00923 236 Pfam Lateral organ boundaries (LOB) domain 44 141 IPR004883 -
Pte18g00923 236 MobiDBLite consensus disorder prediction 179 198 - -
Pte18g00923 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 40 180 - -
Pte18g00923 236 ProSiteProfiles LOB domain profile. 43 144 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00923 Pte-Chr18 21722404 21723343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00923 10 151 AS2 family AT2G30340 75.000 3.95e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g00923 LOB 7.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00923 - - gmx:100813489 254.988