Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00918 ATGCCAGAGATCGAACATGTTTCAGACGATGCCTTGTTTGGAAAATATGAGCTCGGCAGGCTTCTGGGTCGTGGAGCTTTTGCCAAGGTTCATCATGCCAGAAACATGGAGACGGGTCAGAGTGTCGCCATTAAAATCATCAATAAGAAGAAAATCTCAACTTCAGGTCTCATGTCCAACGTCAAGCGTGAAATTGCGATTATGCGACGTTTGCGCCATCCAAACATTGTGAGGCTTTATGAGGTTCTAGCGACGAAGACGAAAATATTCTTCGTCATGGAATATGTGAAGGGCGGTGAGCTGTTTGAAAAGGTTGCTAAAGCGAGGTTGAGTGAAGATCTAAGCCGGAGGATTTTCCAGGAATTGATTTCAGCTGTTGGGTACTGTCATCTACGCGGTGTTTTCCACCGTGATTTGAAGCCTGAGAATCTCTTGCTTGACGAGAACGGGAATTTGAAGGTTACAGATTTCGGGCTTAGTGCTGTGACGGAGCAGTACCGACCCGATGGGTTGCTACATACTTTGTGTGGTACACCGGCCTATGTTGCTCCTGAGGTTTTGTCGAAGAAAGGTTATGATGGTGCTAAAGTTGATGTTTGGTCTTGTGGCGTGATCCTTTTTGTGTTGAATGCTGGGTATCTTCCATTCAATGATCCAAACCTAATGGTGATGTATAAGAAAATCTATAAAGGAGAGTATCGATGTCCGAGGTGGACGTCTCCCGAACTCAAACACTTGTTGTCCAAGCTGTTGGATACAAATCCAAATACAAGGATTACAATGGATGAGATTGTCAAACACCCATGGGTTAGAAGAGGTCGAAACGAAATCAAATTCTATCATGAATTTGCAGAGGATGATTGTGAGCCCAAAGTCAGGGATGGCGCAGAGTCTTCAAACAGTAACGGCTTGAATGCGTTTGATATCATATCATTTTCGGCAGGATTGGATTTGTCTCGTATGTTGGATGACTCATGTAATGCTGTTGAAGACTGCGAGCGATTCATCTTATCCCAATCTCCAGCAAAAATTTTGGATGAGTTGAACAAATTTGCTGTTGCTGAAAGGTTGAAGGTGAATAAGTTTAAAGAACAGGGGCTGGAGCTACAAGTAAAGAATGGAGATTTCAGAATGGGTGTTGAGGTGTACACGTTGACTGATTATTTGGTGGTTGTGGAAGCAAAGAGGAGAGGCAGTGATGCTGTGGCTTTCAAAGATGTTTTGAATAAGCTGAAGCCTTTCCTATGTGACCAAGACCGACAGCATCATCAACGAGAACAAGGAGGAGGAGGAGGAGTAGCAGCTGATCATTCTCAAGTTTCCGGTGATTGA 1332 0.4399 MPEIEHVSDDALFGKYELGRLLGRGAFAKVHHARNMETGQSVAIKIINKKKISTSGLMSNVKREIAIMRRLRHPNIVRLYEVLATKTKIFFVMEYVKGGELFEKVAKARLSEDLSRRIFQELISAVGYCHLRGVFHRDLKPENLLLDENGNLKVTDFGLSAVTEQYRPDGLLHTLCGTPAYVAPEVLSKKGYDGAKVDVWSCGVILFVLNAGYLPFNDPNLMVMYKKIYKGEYRCPRWTSPELKHLLSKLLDTNPNTRITMDEIVKHPWVRRGRNEIKFYHEFAEDDCEPKVRDGAESSNSNGLNAFDIISFSAGLDLSRMLDDSCNAVEDCERFILSQSPAKILDELNKFAVAERLKVNKFKEQGLELQVKNGDFRMGVEVYTLTDYLVVVEAKRRGSDAVAFKDVLNKLKPFLCDQDRQHHQREQGGGGGVAADHSQVSGD* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00918 443 Gene3D Transferase(Phosphotransferase) domain 1 8 304 - -
Pte18g00918 443 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Pte18g00918 443 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00918 443 CDD CIPK_C 305 416 - -
Pte18g00918 443 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte18g00918 443 SUPERFAMILY Protein kinase-like (PK-like) 13 279 IPR011009 -
Pte18g00918 443 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Pte18g00918 443 MobiDBLite consensus disorder prediction 420 443 - -
Pte18g00918 443 Gene3D Kinase associated domain 1, KA1 305 418 - -
Pte18g00918 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 400 - -
Pte18g00918 443 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00918 443 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00918 443 Pfam NAF domain 304 361 IPR004041 GO:0007165
Pte18g00918 443 FunFam Non-specific serine/threonine protein kinase 6 301 - -
Pte18g00918 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00918 Pte-Chr18 21702592 21705292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00918 1 418 CBL-interacting serine-threonine protein kinases AT2G30360 63.657 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte18g00918 Pkinase 4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00918 - - qsa:O6P43_014145 569.311