Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00916 ATGCGCAAGTACAGATTCAAATTGTCAGATATGATCCCCAATGCCTGGTTTTACAAACTCAAAGACATGAGCAGAACCAGAAAGCAACATTCCTCTCCTACTATGAAGAACAATGCATCCTCGCCAACATCAACATCCCAAAAATCACACTTCTCACACCCAAGATATTCTTATTATCTGTCCACTGAATCCAGAAGAACTGGTAAGCTATACAGTTCACCCAAAAACCCAAAAGTTTTAGATACTCATTTCCCTGAATCACCTAGAAGATCATCCAAGAGAAAAGAAAGAAGGAAGACTATGTACAAGCCTTCACCGAGAGTTCTTTCCTCCTCTAACTCCGCCACCTGCAATTACCATTACCCAGATAATTCAGTTCATGATCCAAATCCTACTCAATCTCCGGACTATTCTGTTGAGGCTTCTTCCGGATCAGACCTAAATGGATATATCTCATCGGATTCAGAGCGTGATGACCACTTTGTGTTGCCTGACACGTTTGATGGAGGGGCAGCAGCCCCTTGGTCAGGCTCTTGCAGTTGTAGAGTGAGCTCCTCTACTAAGGACATAATCATTGACATGAACAATGACACAGGAACTAGGAAGTCTGACAAGCTAGATGGCGTTGGTGCAATTTCAGAGTCAGAATTATCACCACCATCGACAAAGCCATCTAAATTGGACGAAGCTCTCTCTGAATACCCCACACTCAGCATGCATGTACCAGAAGAGAAAAACATTAGGATCCAAAAAGAACATAGAAGATCCAGTCCGCGAAAGTCCTCAGCTAGTTCTACAGGAATAAGACTTAGAACCACTTCTTCTAAGTTTGCCATGAGTAGGAAAGCTCAAGGCCATGCAAGAAAGGATATGGCATGTAGTCCAAGTAAAGCAGTCAGGAACAACAACTTCCAAGACAGTTTTGCGGTTGTAAAGTCTTCAGTTGATCCAGAAAGAGACTTCAGAGATTCAATGATGGAAATGATTGTGGAGAACAATATTCAGGGGTCATCAAAAGACTTGGAAGACCTTTTAGCTTGTTATCTTTCATTGAACTCGAAAGAGTACCACAGTCTCATAGTCAAGGCATTTGAGCAAGTTTGGTTTCAGATGGCTCACCTCAAACTGTGA 1131 0.4235 MRKYRFKLSDMIPNAWFYKLKDMSRTRKQHSSPTMKNNASSPTSTSQKSHFSHPRYSYYLSTESRRTGKLYSSPKNPKVLDTHFPESPRRSSKRKERRKTMYKPSPRVLSSSNSATCNYHYPDNSVHDPNPTQSPDYSVEASSGSDLNGYISSDSERDDHFVLPDTFDGGAAAPWSGSCSCRVSSSTKDIIIDMNNDTGTRKSDKLDGVGAISESELSPPSTKPSKLDEALSEYPTLSMHVPEEKNIRIQKEHRRSSPRKSSASSTGIRLRTTSSKFAMSRKAQGHARKDMACSPSKAVRNNNFQDSFAVVKSSVDPERDFRDSMMEMIVENNIQGSSKDLEDLLACYLSLNSKEYHSLIVKAFEQVWFQMAHLKL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00916 376 MobiDBLite consensus disorder prediction 194 294 - -
Pte18g00916 376 MobiDBLite consensus disorder prediction 244 259 - -
Pte18g00916 376 NCBIfam uncharacterized plant-specific domain TIGR01568 308 371 IPR006458 -
Pte18g00916 376 Pfam Transcriptional repressor, ovate 314 371 IPR006458 -
Pte18g00916 376 ProSiteProfiles OVATE domain profile. 310 370 IPR006458 -
Pte18g00916 376 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 66 371 IPR038933 GO:0045892
Pte18g00916 376 MobiDBLite consensus disorder prediction 260 280 - -
Pte18g00916 376 MobiDBLite consensus disorder prediction 105 151 - -
Pte18g00916 376 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Pte18g00916 376 MobiDBLite consensus disorder prediction 30 71 - -
Pte18g00916 376 MobiDBLite consensus disorder prediction 24 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00916 Pte-Chr18 21688950 21690080 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte18g00916 Ovate 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00916 - - gmx:100780926 343.199