Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00913 ATGCATCAAGATCCATCATCTTCTTCGAACCCTAAGACGAACACCGTAACTGGCAATGCCAATGTGAATCGGGACCATTCTCACATAATCCAACTCCCACCTCTTGTCAATTCAAACGTATCACCTCCTTCCACGACCACTTCTTCATCTTCATCTTCCGTCTTCATCAGAAATGGCGCCAACGGTGGCAACGGGATCATTGGCGGGTCCCACGCCCACAACAATCACACCCATACCAACCATAGGAGGGCTCACTCTGAGGTTAGCTTCACAATGCCGGACGATTTGATGGATCTGTTGCCGTCCGATCCGTTTAATGGTGGTGGGTCATCCGCGGCTAGCCTTGATGAGATTGGATCGGAAGATGATCTCTTTTCTACGTACATGAATGTTGACAAGCTCGGAGGAGGAGGAGCCAATGGGTCGTCGGAGCAGAGTGGAAACGGTAACGCTAATAACAGTGCTGAGGTAGATAAGAGTTCGGATCCGAGTCCGAGTACAAGTGCCAATGCAAGGCCCAGACACCGGCATAGTTACTCGGTGGATGGTTCGACATCCAATTGTATGTTTGGTGAAATTATGGAGGCAAAAAAGTCAATGCCGCCTGACAAGTTAGCTGAGCTTTGGACCATTGATCCCAAGCGAGCTAAGAGAATAATGGCAAATCGGCAATCTGCTGCTCGGTCCAAAGAGAGAAAGGCTCGTTATATACAAGAACTTGAGCGCAAAGTTCAGACTCTCCAGACTGAAGCCACCACCCTTTCTGCTCAACTCACACTATTCCAGAGGGACACAACAGGTTTGAGTAACGAAAACTCCGAGCTTAAGCTTCGCTTGCAAGCCATGGAGCAACAAGCTCAACTTCGTGATGGTAAACGTTATCCGACAATAATAAGCCTTGTGTCATCCATGAATTATGGCATTTATGTTCCAGCAGTGAAGGTATTTGTCCAAAATGAGCTTACAAGTTACATTGAATTTTGTTCATCTTGTTATACAGCACTGAATGAGGCACTTAAAAAGGAGGTTGAGAGACTCAAACTTGCTACGGGAGAGATGATGAATCCTTCTGAGTCCTTTAGTATGGGAATGCCTCAAATGCCATTTCCAGGAGCAAATTTCTTCCCTCTACAACCTCATACTGGAGTTCCTTGTCAGCAAAACGTGCAAATGCCACCATTCAGTCATTCCCAGTCAGGTATAGCAGCTCACCAAATGCATCGATCAAGTTCTCATTCCCTCCCAGATATAATGCAGAATGACCAACTTGGTCGTTTGCAAGGGCTTGACATAAGTAGCAAAGGATCACCTCTCGTGAAGTCAGAAGGCCCTTCGCTTTCAGCAAGTGAGAGCAGCACCACTTTTTGA 1368 0.4671 MHQDPSSSSNPKTNTVTGNANVNRDHSHIIQLPPLVNSNVSPPSTTTSSSSSSVFIRNGANGGNGIIGGSHAHNNHTHTNHRRAHSEVSFTMPDDLMDLLPSDPFNGGGSSAASLDEIGSEDDLFSTYMNVDKLGGGGANGSSEQSGNGNANNSAEVDKSSDPSPSTSANARPRHRHSYSVDGSTSNCMFGEIMEAKKSMPPDKLAELWTIDPKRAKRIMANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSNENSELKLRLQAMEQQAQLRDGKRYPTIISLVSSMNYGIYVPAVKVFVQNELTSYIEFCSSCYTALNEALKKEVERLKLATGEMMNPSESFSMGMPQMPFPGANFFPLQPHTGVPCQQNVQMPPFSHSQSGIAAHQMHRSSSHSLPDIMQNDQLGRLQGLDISSKGSPLVKSEGPSLSASESSTTF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00913 455 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 275 IPR004827 GO:0003700|GO:0006355
Pte18g00913 455 MobiDBLite consensus disorder prediction 139 183 - -
Pte18g00913 455 Gene3D - 214 264 - -
Pte18g00913 455 MobiDBLite consensus disorder prediction 1 20 - -
Pte18g00913 455 MobiDBLite consensus disorder prediction 428 455 - -
Pte18g00913 455 MobiDBLite consensus disorder prediction 136 183 - -
Pte18g00913 455 CDD bZIP_plant_RF2 215 264 IPR044759 GO:0003700|GO:0006355
Pte18g00913 455 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 41 419 - -
Pte18g00913 455 Coils Coil 230 257 - -
Pte18g00913 455 MobiDBLite consensus disorder prediction 34 85 - -
Pte18g00913 455 FunFam probable transcription factor PosF21 213 266 - -
Pte18g00913 455 SUPERFAMILY Leucine zipper domain 214 265 IPR046347 GO:0003700|GO:0006355
Pte18g00913 455 MobiDBLite consensus disorder prediction 438 455 - -
Pte18g00913 455 Pfam bZIP transcription factor 214 258 IPR004827 GO:0003700|GO:0006355
Pte18g00913 455 MobiDBLite consensus disorder prediction 394 416 - -
Pte18g00913 455 Coils Coil 265 285 - -
Pte18g00913 455 SMART brlzneu 210 274 IPR004827 GO:0003700|GO:0006355
Pte18g00913 455 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00913 Pte-Chr18 21671658 21675570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00913 81 456 bZIP Transcription Factor Family AT2G40620 48.000 2.38e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte18g00913 bZIP_1 7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00913 - - gmx:100790732 439.113