Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00910 ATGGGGTCTTTAATTTGCATGAATATTTCTTGTGGGTCGTCAACGAGCCATGATGGGAAGAAGGGTTGGCCTCTTCGATCTGGTGGATTCGCTCATCTCTGCTTTAATTGCGGGTCTGCCTTTGAAAATTCAGCATTTTGTGATAAATTCCATCTTGATGAAACTGGTTGGAGAGAATGCCACTTTTGCAAGAAGCATGTCCATTGTGGATGTATAGCATCAAAAGCTTTGTTTGATCATCTTGATTTTGGGGGAATAAGCTGTAAGAACTGTCTAAAGGTTTCCCAACTTCATTTGATTCAAAATGCTGAAATTCCTAATGGGTTTGGTATGCTGACAAGCAATCATACTAGTGAATCAGAATTGACTCAGGTTGAGAAAAGATTATTTATGGATAATGGTGATGAGGAAAAACTCATGCAATTGTGCAGAGTCATGGAAGCTAATGAATCCAATCTCAGATTTCAACCACATAGAGATGAGATGAATGGTTCTTGTGGGAATATCAATCAAGTTATGGCTCAGTCTGGGACAATAGGGACGGGTTTGTCAAATGTAACTGAGACATCTGCTCAACCATTGACATTTACTAAACTTGAAAATGGTAAACCACCATTGGAGAACAAGGATTTCCTGGAATCGCCTGCCACACCATCTCTAACTATGTCCTTGGGTGGCCTATCAGGAAGTACATTGCTGCCTTTCACTGGTGGAGTTGTAGAAGAAAAAGATCAAGGGAAAGCATCTTCTCTATTTTATCCTGGGCAAAAAGTTCGACCTATATTGCCCAAACCTTCAAGGACTTCTGAGACAAATAAAGCGTCAAATTCTCAGATGCGCATTGCTCGGCCTCCTGCTGAGGGACGTGGGAAGAATCAATTGCTTCCTCGATACTGGCCCAGAATTACTGACCAAGAACTGGAACAATTGGCTGGAGATTTGAATTCCACTGTCATCCCATTATTTGAGAAGCAGCTGAGTGCAAGTGATGCTGGTAGAATTGGGCGTTTGGTTCTCCCAAAAGCTTGTGCAGAAGCATATTTTCCTCCTATCAATCAATCAGATGGAGTTCCTTTGAGGATGCAAGACGTAAAAGGAAATGAATGGACTTTTCAGTTTAGATTTTGGCCTAACAACAACAGCAGGATGTATGTTTTAGAGGGTGTGACCCCTTGCATACAGTCTATGCAGTTAATAGCTGGTGATACTGTAACATTTAGCCGCATAGATCCTGGAGGCAAACTTGTCATGGGCTTTCGGAAGGCATCAATCTTAGAGGATTCCCAGGATGCTTCAGCATCAGCCGTTTCCAGTGGCACATCTTCTAAAGAAAACATCTTTATTGGTGCAAATGAGAATCATACATCAGGAAGCCACTCTGATGATCTTTTACCAGCGGAGGGAGGCAAGGATGTTCACTTAAATGCCTCATCAGAACATGTCCATTTAGCCAATCGGGATGGTGGCCTGCCTGAAAGTGATAATCATAAGGGTATGAATAATAATGGACCACTAAAGCAACTGGTTACTGGTTCTGAAAAGAAGAGGACCAAAAACATTGGGCCTAAAAATAAGCGTTTGCACATCCATAGTGAAGATGCTCAGGAGCTGACAATTACATGGGAAGAAGCACAGGACTTGCTTCGTCCACCACCAAGTGCCAAACCAAGCATCGTGACAATTGAGGACCATGTTTTTGAAGAATATGATGTGGCACCAGTCTTGGCAAAGAGAACAGTATTTTCAGCTCGACCTACTGGGTAA 1764 0.4235 MGSLICMNISCGSSTSHDGKKGWPLRSGGFAHLCFNCGSAFENSAFCDKFHLDETGWRECHFCKKHVHCGCIASKALFDHLDFGGISCKNCLKVSQLHLIQNAEIPNGFGMLTSNHTSESELTQVEKRLFMDNGDEEKLMQLCRVMEANESNLRFQPHRDEMNGSCGNINQVMAQSGTIGTGLSNVTETSAQPLTFTKLENGKPPLENKDFLESPATPSLTMSLGGLSGSTLLPFTGGVVEEKDQGKASSLFYPGQKVRPILPKPSRTSETNKASNSQMRIARPPAEGRGKNQLLPRYWPRITDQELEQLAGDLNSTVIPLFEKQLSASDAGRIGRLVLPKACAEAYFPPINQSDGVPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLIAGDTVTFSRIDPGGKLVMGFRKASILEDSQDASASAVSSGTSSKENIFIGANENHTSGSHSDDLLPAEGGKDVHLNASSEHVHLANRDGGLPESDNHKGMNNNGPLKQLVTGSEKKRTKNIGPKNKRLHIHSEDAQELTITWEEAQDLLRPPPSAKPSIVTIEDHVFEEYDVAPVLAKRTVFSARPTG* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00910 587 MobiDBLite consensus disorder prediction 484 519 - -
Pte18g00910 587 FunFam B3 domain-containing transcription repressor VAL1 300 427 - -
Pte18g00910 587 ProSiteProfiles B3 DNA-binding domain profile. 322 423 IPR003340 GO:0003677
Pte18g00910 587 CDD B3_DNA 320 421 IPR003340 GO:0003677
Pte18g00910 587 Gene3D - 300 424 IPR015300 -
Pte18g00910 587 SUPERFAMILY DNA-binding pseudobarrel domain 319 421 IPR015300 -
Pte18g00910 587 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 587 - -
Pte18g00910 587 MobiDBLite consensus disorder prediction 257 293 - -
Pte18g00910 587 SMART B3_2 322 423 IPR003340 GO:0003677
Pte18g00910 587 MobiDBLite consensus disorder prediction 265 279 - -
Pte18g00910 587 Pfam B3 DNA binding domain 322 421 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00910 Pte-Chr18 21658192 21663583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00910 1 587 B3 DNA Binding Superfamily AT2G30470 45.409 2.06e-160 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte18g00910 B3 3.8e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00910 K09287 - qsa:O6P43_014159 758.444