Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00902 ATGAAGTTATTTTCAAGGCTAGTGCTTCTTTTTCTTTTTGCTATGGGCATTGTTTTGCCTGTCACCATTGCTGACCTCAGTTCTGACAAGCAAGCACTTCTAGACTTTGCTGCTGCCGTGCCCCATCGCCGAAAACTCAACTGGAATCCTGCCACCTCAGTCTGCATATCATGGGTGGGTGTTGTTTGTGATGCAAACAATTCCCATGTTATTTCCCTCCGTCTTCCTGGAATAGGACTGATTGGTAGTGTTCCTGCTAATACACTTGGTAAGCTGAATGGCCTCAAAATTCTCAGTCTCCGTTCAAACCTACTCAATGGTAATCTACCTTCTGATATTGCTTCTCTTCCATCACTTAATTATCTATACCTCCAGCGTAATAACCTCTCTGGTAATATTCCTACTCTGCTGTCTGCCCAAATCAGTGTACTAGACCTGTCATACAATTCCTTGAGTGGCAGCATTCCGCAGACGATAAAGAATTTAACACAACTTACTAGACTGAACCTCCAAAATAATAGTTTATCTGGTCAAATACCCAAGTTAGACCTTCCAAATCTTAAGCAATTAAATTTAAGCTACAACCATTTGAATGGTTCTATCCCGAGGCCTCTTCAAAAGTTTCCTAACTCATCTTTTGAAGGAAACTCTTTCCTATGTGGTCCACCTTTAACTCCTTGCTTTCCTAATGTTCCTCAACCTTCTCTATCTCCTACTTCCCCCCCAGCACCTGTTCATCCAAAACAAACCTCCAAAAGAAAACTTAGCATGGGAGCCATCATTGCAATTGCAATTGGAGGATCCGTGTTACTGATTTTTGTAGCTCTTGTCGTTGTTATTTGTTGTATCAAGAAAAAAGACAGCAGTCACCCTGCTGCAAGTAAAGGTAAAGGTCCTATTGGTGCGAGGGGCGAAAAGCTGGGAGAAGGGTTTGGGAGTGGGGTGCAAGAACCAGAGAAAAACAAGCTGGTCTTTTTTGAAGGAAGCTCTTATAATTTTGATCTCGAAGATTTATTGCGAGCTTCAGCTGAAGTTCTCGGAAAGGGTAGTTACGGGACGGCATACAAGGCTATTCTAGAGGAGTCAACAACAGTGGTGGTGAAACGATTAAAGGAAGTAGTGGTTGGAAAGAAAGACTTTGAGCAGCAAATGGAGGTCGTTGGTAGACTTGGGATGCATCCAAATGTTGTGCCTCTTCGAGCTTACTATTATTCCAAAGATGAAAAGCTTCTAGTTTATGACTATTATTCGGGAGGCAACCTGTCCACGTTGTTACATGGAAATAGGAGTATCGAAAGAACACCATTAGACTGGGTGTCTAGAGTGCGCATATCTTTAGGAATTGCCAGAGGCATTGCTCACATACATTCTGTTGGTGGCTCAAAGTTCACGCATGGAAACATTAAGTCCAATAACGTTCTAATTAATCAAGATCAAGACGGTTGCATATCTGATTATGGCCTGACTGCACTTATGAATGTCCCTGCAACCCCAACTCGAACTGTTGGCTATCGTGCCCCTGAGGTGATCGAGACCCGCAAGCATACACACAAATCAGATGTTTATAGCTTTGGTGTACTTCTCCTTGAGATGCTTACTGGTAAAGCTCCTATCCAGTCTCCAGGACGTGATGACATGGTTGATCTCCCCAGGTGGGTTCAATCTGTTGTAAGGGAAGAATGGACAGCTGAGGTTTTTGACGTGGAGTTGATGAGATACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGCGTGGCGAGGATGCCAGACATGAGACCCAACATGGAAGAAGTTGCTAGAATGATTGAAGAAATCCGGCAATCTGACTCAGAAAACCGACCTTCCTCTGAGGAAAACAAATCAAAGGACTCTAATGTGCAGACAACCCCTTAG 1911 0.4328 MKLFSRLVLLFLFAMGIVLPVTIADLSSDKQALLDFAAAVPHRRKLNWNPATSVCISWVGVVCDANNSHVISLRLPGIGLIGSVPANTLGKLNGLKILSLRSNLLNGNLPSDIASLPSLNYLYLQRNNLSGNIPTLLSAQISVLDLSYNSLSGSIPQTIKNLTQLTRLNLQNNSLSGQIPKLDLPNLKQLNLSYNHLNGSIPRPLQKFPNSSFEGNSFLCGPPLTPCFPNVPQPSLSPTSPPAPVHPKQTSKRKLSMGAIIAIAIGGSVLLIFVALVVVICCIKKKDSSHPAASKGKGPIGARGEKLGEGFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKKDFEQQMEVVGRLGMHPNVVPLRAYYYSKDEKLLVYDYYSGGNLSTLLHGNRSIERTPLDWVSRVRISLGIARGIAHIHSVGGSKFTHGNIKSNNVLINQDQDGCISDYGLTALMNVPATPTRTVGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPIQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVARMPDMRPNMEEVARMIEEIRQSDSENRPSSEENKSKDSNVQTTP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00902 636 Pfam Leucine rich repeat 81 129 IPR001611 GO:0005515
Pte18g00902 636 MobiDBLite consensus disorder prediction 609 636 - -
Pte18g00902 636 MobiDBLite consensus disorder prediction 609 626 - -
Pte18g00902 636 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Pte18g00902 636 Gene3D Phosphorylase Kinase; domain 1 307 415 - -
Pte18g00902 636 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 623 - -
Pte18g00902 636 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Pte18g00902 636 Gene3D Transferase(Phosphotransferase) domain 1 417 635 - -
Pte18g00902 636 ProSitePatterns Protein kinases ATP-binding region signature. 346 377 IPR017441 GO:0005524
Pte18g00902 636 SUPERFAMILY Protein kinase-like (PK-like) 344 618 IPR011009 -
Pte18g00902 636 PRINTS Leucine-rich repeat signature 184 197 - -
Pte18g00902 636 PRINTS Leucine-rich repeat signature 141 154 - -
Pte18g00902 636 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Pte18g00902 636 SUPERFAMILY L domain-like 40 227 - -
Pte18g00902 636 Pfam Protein kinase domain 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00902 636 ProSiteProfiles Protein kinase domain profile. 340 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00902 636 PANTHER OS05G0588300 PROTEIN 4 623 - -
Pte18g00902 636 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Pte18g00902 636 FunFam pollen receptor-like kinase 1 310 415 - -
Pte18g00902 636 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00902 Pte-Chr18 21494956 21499135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00902 3 633 Receptor kinase-like Gene Family AT5G58300 66.667 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g00902 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00902 - - gmx:100796171 954.125