Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00900 ATGCATCATTCTAGAGCTTGGGCATATGAAGTCATTGTTGGGTTGGGATTGTGCTGGTGTTCCCTTCTGGTTGCTGGACAGAACAATATTACAGCTCCCGATGAAGTCACGGCATTGCTTTCCATCAGGAGAAGGTTGATTGATCCCAATGGAAATCTCACTAACTGGAACCAAGGAGACCCATGCACTGGACGGTGGAATGGAGTTAGCTGCTACAATTCAACTTTGGAAGATGGATACTTACATGTCCAAGAATTGCAACTTTTAAATCGGAACCTGTCTGGAAATTTGTCACCAGCTCTTGGAAACTTATCTCGCTTAAAAATAATGAGCTTTATGTGGAATGAGATAAGCGGTTCAATCCCAAAGGAGATTGGCAATATCAAAACTCTGGAACTACTGCTCTTGAATGGAAATCAATTAACAGGTCCATTGCCTGAAGAACTTGGCTATCTTCCAAACCTGGACAGGATTCAAATCGATCAAAACCAAATTTCCGGACCGCTACCTAAATCTTTTGCAAACTTAAATAAGACGAAGCATTTTCACATGAACAACAATTCAATTAGTGGTCAAATACCTACTGAGCTGTCCAGATTACCCAATCTTGTTCACTTTCTTCTTGATAACAACAACTTATCAGGCTTTCTTCCTCCTCAGTTCTCCGAGTTGCCAAACTTGCATATACTTCAACTTGATAACAACAACTTCAGACGGACATCCATTCCAGATTCTTACAGCAATATGACAAAATTGTTCAAGTTGAGCCTTAGGAATTGCAGCTTGCAAGGACGTGTTCCTGATCTGAGCAATATACCCAACCTTTATTATATTGACCTCAGTAATAATCAGTTGGGTGGATCCATTCCTGGAAATAAGCTTGCAGAGAATATCACAACAATTGACTTGTCGAACAACCAGCTTACTGGACCAGTTCCGTCTAACTTTTCACTACTTACACAACTCCAGAAATTGTCAATGGCCAACAATTCATTGAATGGCACTCTCCCAACACTATGGCAAAATTGGACTTCGAATGGAAAGGGAACTCGCACCTTGGACTTTAGAAATAACAAAATTGGTGCTGTTTCAGGCAACATTGATCTTCCTCAGAATGTCACTCTTTGGCTTGATGGAAATCCCCTTTGTAACAATGGTAACTTAGCCCAATACTGTGGACCTGAAAGCATCACTCTTGTTGACACACCTGGCTCAACAAGCTCCAGTATTCAATGTCGGGTTCAATCATGCCCACCTCCTTTTGAATATTCTCCTAATGACCCTGAACCTTGTTTCTGCGCTGCCCCACTTATCATTGGATATCGATTGAAAAGTCCTGGATTCATAGATTTTCGTCCATATCAAAACCAATTCAACACTTATCTGACAAATGGTCTTGATTTAAATATTTATCAGCTCAACGTTACTTCTTTTGCATGGCAAGAAGGCCCTCGTCTTTGGATGGACTTTAAGATTTTTCCTGAGTTCGACAATCGCTCTCATGTTTTCAATTCTAGTGAACTTCAAAGACTTATTAGCATGTTCACGGGGTGGAGAATTCCTGACAGTGATTTATTCGGGCCTTACGAACTTATCAACGTTGTATTACTGGATCCTTACAAAAATGAGACTGTTTTGGTTCCAAGTTCAGGTTTAAGCAAGGGTGCAGTTGCTGGTATTGTATTGGGATCTATTGCTGGTGCAGTTACTTTATCTGCAATTGCTACTATCATTATACTGAGAGTCCATGCAAAAGATTACTTAGCAGTTTCGAAACGACGACAAGCATCCAAGATCTCAATAAAAATTGATGGTGTGAGGAGCTTGAGTTACACAGAAATGGCTGCTGCTACAAACAATTTTGACAGCTCCGCACAAGTTGGCCAAGGCGGATATGGCAAGGTCTACAAAGGCATTCTTGCTGATGGCACAGTTGTAGCCATTAAACGTGCGCAAGAGGGATCGCTACAAGGTGAAAGGGAGTTTCTTACTGAAATACAGCTGTTGTCGAGGTTACATCACCGCAATCTCGTCTCTTTGGTTGGTTACTGTGATGAAGAAGGTGAACAGATGCTAGTCTATGAATATATGCCGAATGGCACGTTAAGGGATCACGTTTCTGCTAATGCTAAACAACCTCTGAGCTTCTCTATGAGATTGAGGGTTGCCCTGGGATCTGCTAGAGGTATTCTCTATCTGCATACAGAAGCCGATCCTCCCATATTCCATCGAGACATCAAGGCCAGCAACATTTTGTTAGACTCCAAGTTTACTGCTAAAGTTGCTGATTTCGGACTTTCAAGGCTCGCCCCAGTACCAGATATGGAAGGAATTTTGCCTGCTCATGTATCCACTGTGGTGAAAGGGACACCAGTAAGATTTGCTTGA 2388 0.4175 MHHSRAWAYEVIVGLGLCWCSLLVAGQNNITAPDEVTALLSIRRRLIDPNGNLTNWNQGDPCTGRWNGVSCYNSTLEDGYLHVQELQLLNRNLSGNLSPALGNLSRLKIMSFMWNEISGSIPKEIGNIKTLELLLLNGNQLTGPLPEELGYLPNLDRIQIDQNQISGPLPKSFANLNKTKHFHMNNNSISGQIPTELSRLPNLVHFLLDNNNLSGFLPPQFSELPNLHILQLDNNNFRRTSIPDSYSNMTKLFKLSLRNCSLQGRVPDLSNIPNLYYIDLSNNQLGGSIPGNKLAENITTIDLSNNQLTGPVPSNFSLLTQLQKLSMANNSLNGTLPTLWQNWTSNGKGTRTLDFRNNKIGAVSGNIDLPQNVTLWLDGNPLCNNGNLAQYCGPESITLVDTPGSTSSSIQCRVQSCPPPFEYSPNDPEPCFCAAPLIIGYRLKSPGFIDFRPYQNQFNTYLTNGLDLNIYQLNVTSFAWQEGPRLWMDFKIFPEFDNRSHVFNSSELQRLISMFTGWRIPDSDLFGPYELINVVLLDPYKNETVLVPSSGLSKGAVAGIVLGSIAGAVTLSAIATIIILRVHAKDYLAVSKRRQASKISIKIDGVRSLSYTEMAAATNNFDSSAQVGQGGYGKVYKGILADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEYMPNGTLRDHVSANAKQPLSFSMRLRVALGSARGILYLHTEADPPIFHRDIKASNILLDSKFTAKVADFGLSRLAPVPDMEGILPAHVSTVVKGTPVRFA* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00900 795 Pfam Protein tyrosine and serine/threonine kinase 625 769 IPR001245 GO:0004672|GO:0006468
Pte18g00900 795 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pte18g00900 795 SUPERFAMILY Protein kinase-like (PK-like) 598 790 IPR011009 -
Pte18g00900 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Pte18g00900 795 SMART serkin_6 621 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00900 795 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Pte18g00900 795 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Pte18g00900 795 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Pte18g00900 795 Gene3D Phosphorylase Kinase; domain 1 591 696 - -
Pte18g00900 795 ProSiteProfiles Protein kinase domain profile. 621 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00900 795 FunFam Leucine-rich repeat protein kinase family protein 585 696 - -
Pte18g00900 795 Gene3D Transferase(Phosphotransferase) domain 1 697 794 - -
Pte18g00900 795 Gene3D Ribonuclease Inhibitor 188 295 IPR032675 -
Pte18g00900 795 SUPERFAMILY L domain-like 47 406 - -
Pte18g00900 795 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Pte18g00900 795 Gene3D Ribonuclease Inhibitor 296 385 IPR032675 -
Pte18g00900 795 PANTHER RECEPTOR-LIKE PROTEIN 55 44 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00900 Pte-Chr18 21466486 21475167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00900 5 791 Receptor kinase-like Gene Family AT5G01950 56.101 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pte18g00900 PK_Tyr_Ser-Thr 3.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00900 - - qsa:O6P43_020474 1149.04