Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00881 ATGATCACAGATCAGGCTTCAGTTACTACTACTGCTTTAGACGTGAAATCTGAACCAACGGTGCAAGAGTCTGCAAAACCAAATAGGTGCAGTACTTACCGGAAGCGAGTAGGTCTCACAGAGTTCAATTGTAGGTGTGGAAATGTGTTCTATGATGCTCATCGCTACTCTGAGAAACACGGTTGCCTATATGACAACCACACTACTGGGCAAGATTCTATTGCAAAAGCTAACCTAGTAGTGAAGACTGATAAGTTGGACAAAATTTGA 270 0.4222 MITDQASVTTTALDVKSEPTVQESAKPNRCSTYRKRVGLTEFNCRCGNVFYDAHRYSEKHGCLYDNHTTGQDSIAKANLVVKTDKLDKI* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00881 89 ProSiteProfiles Zinc finger AN1-type profile. 24 70 IPR000058 GO:0008270
Pte18g00881 89 SUPERFAMILY AN1-like Zinc finger 15 84 IPR035896 -
Pte18g00881 89 Gene3D - 4 85 IPR035896 -
Pte18g00881 89 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 89 - -
Pte18g00881 89 SMART AN1_Zf_4 30 67 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00881 Pte-Chr18 21268539 21268808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00881 15 90 C2H2 Transcription Factor Family AT3G52800 56.410 8.72e-25 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00881 - - sly:101267347 106.686