Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00872 ATGGTAGTTAAGGTTTACGGACCACTGAAGGCAGCCTGCCCACAACGAGTCTTAGTGTGCCTCATTGAGAAAGAAGTAGACTTCGAAGTAGTTCATGTTGATCTTGCTCAAGGAGAACATAAGCAACCTCAGTTCCTTCTCCGCCAGCCCTTCGGACAAGTTCCAGCAATTGAAGACGGAGATTTCAGACTCTTCGAGTCCAGAGCAATAATAAGGTATTATGCAGCAAAATATGCAGACCGTGGTCCTAATTTACTTGGTTCAACTCTTGAAGAAAGAGCTTTAGTGGAGCAATGGCTTGAGGTTGAAGCACACAATTTCAATGACTTGGTATACAACATAGTGCTTCAGCTAGTGGTGTTCCCACAGATGGGACAAACTGGAGACATGGCCTTGGTTAAGAATTGTGAGCAGAAGCTGGAGAAGGTGTTGGATGTTTATGAGAAGAGGCTATCAGAAAGCAAGTATCTAGCTGGAGACAAATTCACCTTGGCTGATTTGAGCCATCTCCCTGCAATGAAGTATCTGATGAATGAAGCAAACATGGGGCACTTGATCACAAACAGGAAAAGTGTGAGTGCTTGGTGGGAAGACATTTCAAGCAGGCCTGCCTGGAAGAAATTAATGAAGCTTGCTGAATGTTAG 645 0.4434 MVVKVYGPLKAACPQRVLVCLIEKEVDFEVVHVDLAQGEHKQPQFLLRQPFGQVPAIEDGDFRLFESRAIIRYYAAKYADRGPNLLGSTLEERALVEQWLEVEAHNFNDLVYNIVLQLVVFPQMGQTGDMALVKNCEQKLEKVLDVYEKRLSESKYLAGDKFTLADLSHLPAMKYLMNEANMGHLITNRKSVSAWWEDISSRPAWKKLMKLAEC* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00872 214 Pfam Glutathione S-transferase, N-terminal domain 1 73 IPR004045 -
Pte18g00872 214 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Pte18g00872 214 FunFam Glutathione S-transferase F2 87 209 - -
Pte18g00872 214 Gene3D Glutaredoxin 1 86 - -
Pte18g00872 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 210 - -
Pte18g00872 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Pte18g00872 214 CDD GST_N_Phi 2 77 - -
Pte18g00872 214 CDD GST_C_Phi 91 209 IPR034347 -
Pte18g00872 214 FunFam Glutathione S-transferase F2 2 86 - -
Pte18g00872 214 Gene3D - 87 209 - -
Pte18g00872 214 Pfam Glutathione S-transferase, C-terminal domain 113 203 IPR004046 -
Pte18g00872 214 SFLD Main (cytGST) 4 202 - -
Pte18g00872 214 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Pte18g00872 214 SUPERFAMILY GST C-terminal domain-like 81 210 IPR036282 -
Pte18g00872 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 214 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00872 Pte-Chr18 21130323 21131873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00872 1 212 Glutathione S-transferase Gene Family AT3G03190 60.377 6.01e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00872 K00799 - pvy:116121148 362.459