Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00869 ATGGCTCCTGTTTCATTGCCTCCTGGGTTTAGGTTTCATCCAACAGATGAGGAACTTGTAGCATACTATCTTAGGAGAAAGATCAATGGCCGTAGGATTGAATTAGAGGTTATTCCCGAAGTTGATCTTTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCATTGTTACCAGGAAAAGATCTTGAATGGTACTTCTTTAGTCCCCGAGATAGAAAATATCCAAATGGTTCAAGAACAAATCGTGCAACCAAAGCTGGATATTGGAAGGCCACAGGCAAAGACCGCAAGGTGCTATCCCAGTCCAGAGCTGTAGGCATGAAGAAAACCCTAGTCTATTACCGTGGTAGGGCTCCACATGGTTCTCGCACTGCTTGGGTGATGCATGAGTATCGTCTTGACGAAAGAGAATGTGAAGTTGCTAATGGCTTGCAGGACGCTTATGCTCTATGCCGTGTGTTCAAGAAAAGTATTATCATCACTCCAAAGATTAATGGAGAGCATTACGTTACCAACCATACTAAACATATTGCGAGTGATCATCAGTCATCCAATATGGATATATACGCAGAAGGAAGAAGAGATGATATGGATAACTCAACCTATAATTTGATTCCTCATGATGGTAGCTCTCCTAGCTTTGGCAATGAATACATGAGTGATCCAACAAGAACATATGGGATGACACAATTCGCATCTCAAAATTCACAATATTTTCCAACATCTTCATATCAAAATTGTGGATCAGCCATGTCATACCCCCCATCCAAGGTTGACGTTGCAATAGAGTGTGCAAGAATGCAGCATAGGTTTGCTTTGCCGCCATTAGAGGTCGAGGACTTCCCACAAGCTGGAATCACTGAGTTCAAGATGCCTCATTCCTCTAGCATCTCTCGAAACAGCAACGAAACCGATATATTGCAAGAAATTCTTTCGGTTGCACAAGCTTCCAAGGATCTGATGAATCAATCTAACTACATAGATCCATGGGCTGGAAATGATCAATATTTTGCTCCCGAAGATGATTTTACCTTCATGGTTGGGAAAGATCAGACTAACCGCAATGAACTGTCCAGTAGTTGTAATTTTATGAGATACGGTGATCAAAAAGCATGGGAGCATTCAATTTCAAACACAGCATCCGTAGATATTGGGGATTTCGATGAGGATTTTAAGACTTCTGACAGAGTTGTAGAGAACTTAAGATGGGTTGGAATGTCAAACGATGACCTAGAGAAGAGTTTTATGGAGGAGCACAAGGTAATTCCAATTGACAATATATCTTGCTACCATGCAGGCAAGAAAGAGCAACAGGCAAGAGGTGGGGGGACTCATGAGCCTCAAAGCAGCAGCAAGCAATACAATGACAACGATCTTGATAATTTTTCACTGGGGTTGATCAATGATAATGCTGACACAAATGACAACAAATTCATAGATGATGGTGACATGGACAACTATTCAAGTTCTCCGAGTTTTGAGGTTGTCGAGGAAATAAAAGTAAACCACGGAATGTTTGTTTCAACTCGACAAGCAGCTGAAACATTCTTCCACCAAATAGTTCCTTCCCAAACAGTCAAGGTTCAGCTAAATCCAGTGGTGGCAAATGTCACCTCTCTGGTGAAAGTGCAAACCCAGACAGCATCAAATGACCATATCAAGAAATACAATGGATCTGTGATCGACAAGTTCGTAAAGACATCGAGGAGTATAGCGAGTGTCATTATTTTCATCAATGCACTTCTTGTGTATTGGGTTAGTACTCTCCAAGGATATGTGGAGCCTGACAACTTGGTTGACAAGGAGAATGATTGCTACAGTGCGAATAACAATGTGGTTGAGAAGAATAATCTGTCTTCTGAAGCAATGATCGACTGGAATGGTAGGAAACAGAAGGTTTGGTATGTTAATGTAAAGAGTGGGAACAGAGTTGGGGTGACATTGAAGAAGATAGGCATTTTCCTAACGGTTTCTTTAGCTGTATGCACCATGTGGGCTAATCATACAAACAATTAG 2016 0.4147 MAPVSLPPGFRFHPTDEELVAYYLRRKINGRRIELEVIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVLSQSRAVGMKKTLVYYRGRAPHGSRTAWVMHEYRLDERECEVANGLQDAYALCRVFKKSIIITPKINGEHYVTNHTKHIASDHQSSNMDIYAEGRRDDMDNSTYNLIPHDGSSPSFGNEYMSDPTRTYGMTQFASQNSQYFPTSSYQNCGSAMSYPPSKVDVAIECARMQHRFALPPLEVEDFPQAGITEFKMPHSSSISRNSNETDILQEILSVAQASKDLMNQSNYIDPWAGNDQYFAPEDDFTFMVGKDQTNRNELSSSCNFMRYGDQKAWEHSISNTASVDIGDFDEDFKTSDRVVENLRWVGMSNDDLEKSFMEEHKVIPIDNISCYHAGKKEQQARGGGTHEPQSSSKQYNDNDLDNFSLGLINDNADTNDNKFIDDGDMDNYSSSPSFEVVEEIKVNHGMFVSTRQAAETFFHQIVPSQTVKVQLNPVVANVTSLVKVQTQTASNDHIKKYNGSVIDKFVKTSRSIASVIIFINALLVYWVSTLQGYVEPDNLVDKENDCYSANNNVVEKNNLSSEAMIDWNGRKQKVWYVNVKSGNRVGVTLKKIGIFLTVSLAVCTMWANHTNN* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00869 671 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 243 - -
Pte18g00869 671 FunFam Nac domain-containing protein 86 15 159 - -
Pte18g00869 671 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pte18g00869 671 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Pte18g00869 671 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Pte18g00869 671 MobiDBLite consensus disorder prediction 434 456 - -
Pte18g00869 671 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pte18g00869 671 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00869 Pte-Chr18 21112327 21116597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00869 1 664 NAC Transcription Factor Family AT1G65910 44.863 1.40e-167 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte18g00869 NAM 3.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00869 - - qsa:O6P43_014229 749.584