Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00867 ATGTCGAATGTAGAAGTGGTCGTTTTGGACTTCTGGGCTAGTCCATTCAGCATGAGAGTTAAGATTGCTTTGGAAGAGAAAGGAGCAGAATATGAGGCTAGAAATGAACACCTGCTCGAAGGCAAAAGTGAGCTCTTGCTAAAAGCAAACCCCATTCACCAAAAGGTACCTGTGCTTTTGCACAACGGACAGCCCGTTGTAGAGTCGACAATCATTGTGAGCTACATTGATGAGGTCTGGCCTTCCAACCCTCTACTACCATCTTCTCCATATGCACGTGCTCAAGCTCGCTTCTGGGCTGACTTCATTGATAAGAAGGTTTATCCAAGTGGAAAAAGTATATGGCTAAGTAATAATGGAGAGGAACAAGAGGTGGCCAAGAAAGAGTTTATCGAGACGTTGAAGCAACTGGAAGAAGCCCTTGGAGAGAAATCCTTCTTTGGTGATGGTGATACCTTTGGGTTTATCGACGTGATAGCAATTCCAATGACCCCTTGGTTTTTGGCATATGAGAAATTTGGGAACTTCAAAGTTGAGGATCACTGTCCCAAACTGAGTGCTTGGATCAAGAGGTGCAAGCAAAGAGAAACTGTTGCAAGAGTTCTTGCAGACCCTGAGATGGTGTATGAACTTATAATCACGATGAGAAAGATGTTGAACTTGAGCATCGAACAAATCACCAGAAAAAGTGATAATTAA 699 0.432 MSNVEVVVLDFWASPFSMRVKIALEEKGAEYEARNEHLLEGKSELLLKANPIHQKVPVLLHNGQPVVESTIIVSYIDEVWPSNPLLPSSPYARAQARFWADFIDKKVYPSGKSIWLSNNGEEQEVAKKEFIETLKQLEEALGEKSFFGDGDTFGFIDVIAIPMTPWFLAYEKFGNFKVEDHCPKLSAWIKRCKQRETVARVLADPEMVYELIITMRKMLNLSIEQITRKSDN* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00867 232 CDD GST_N_Tau 6 80 - -
Pte18g00867 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 211 IPR010987 -
Pte18g00867 232 Gene3D Glutaredoxin 1 88 - -
Pte18g00867 232 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Pte18g00867 232 Coils Coil 120 140 - -
Pte18g00867 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Pte18g00867 232 SFLD Main (cytGST) 3 221 - -
Pte18g00867 232 SUPERFAMILY GST C-terminal domain-like 78 219 IPR036282 -
Pte18g00867 232 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Pte18g00867 232 FunFam Tau class glutathione S-transferase 1 88 - -
Pte18g00867 232 FunFam Glutathione S-transferase U20 89 222 - -
Pte18g00867 232 Pfam Glutathione S-transferase, C-terminal domain 126 191 - -
Pte18g00867 232 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Pte18g00867 232 Gene3D - 89 222 - -
Pte18g00867 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Pte18g00867 232 SFLD Main.3: Omega- and Tau-like 3 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00867 Pte-Chr18 21096284 21097098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00867 1 217 Glutathione S-transferase Gene Family AT1G78380 58.716 7.90e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00867 K00799 - qsa:O6P43_014231 316.235