Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00859 ATGCCCCTGGAAGGAAGCTTCAATATTGAGTCCACTACAAACAGTCCACTTCCTGATCTCTCTCTTCACATTCGTCCTCCCAACAATAATACATGTCCTTCAGCACAACAAGGTAGTAGACAAGATTTGATTACTAATTGCTCCGCCGCAAGAAGTGTTATTATTGGTCACGCTCACACTGAACTCTCTCTAGGAAGTAGTACTCTCACTTCCGGAGGTGAAGAACCCTATCAGGCACACGGGAGTAGCGCAAACAACATCAACAACAACAATTCGTTTTATAACCAAGTGTTTAAATCTCAACTGCATCGTCATACTCACTCAAACAACAGTGCTGCTGCTCATCTGAACCATATACACCGTGGAGTTTCATTAATAGAGGCATCATCTTCTTCATCATCATCAACAGAAACTGCATCCCAAAGCTGCTTGAGACCGATTAAAGGTATTCCGGTCTATCACAACCGGTCGTTTCCTTTCTTGCCCGTGGATCATTCAAGAGAAAGCAAGGAATCCAAGATGTGCTTGTATCATCCTATGTCACCATACTCTTCTTTGTCGTCTTCTTGTTCCTCCTTATGCTCTCCTGCGTCACCTCCAATAAATCCTCCGCCGTACTTCTCAGTTAATTTGGATCCCAGGTCATCAATCTTAAACACAGGTTCGAATAATGTGTCACCAACATGTTTTAGGATGTCAGCTGGGGCTACAGCAGCTGCAGCAGCAAGGTTTAATGGCCCTCCACCTGATGTTTTCAAATCTCACCAATTGCACCATCATAGTCAATACGGGTTTGGTCCCCCTGACGTTTCATCCGGGTTAATGAGATCAAGATTTTCTCCTAAACTTCCGGCCAAGCGAAACATGAGAGCACCGAGAATGCGGTGGACTAGCACACTCCATGCTCGATTTGTTCGCGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCAACGCCAAAGTCAGTTCTTGAGCTGATGGATGTGAAAGATCTCACACTTGCCCATGTCAAAAGCCATTTACAGATGTATAGAACTGTGAAGACAACTGACAAACCTGCAGCTTCTTCAGGCAATTCAGATGGATCTGGTGGAGAAGATGAAATATCACCAGTAGGAAGCGCTGGTGATCACCTTGGACTCCAGTATACAGATCAAAGCAGACCTTCTGATTGCTTTTCGCAACAAGACATGATGGAAGATTCAAATCCTGGCTCTACTCTCTGGATTAACTCCTCGAGTGGCAGAGAAGGATGGCTGCAGACGAGCTCTAACGAAGCAGATGACCTTATGGCACTTAACCTCCCAATACAACAAGCATCTGGAAGAAATCAAATACAGGAATATCACTCGACTGATCAAATCAATAGCCACTTGGCAGAGTCTAATTTGGTCTCCAAAAACCCAAGTTTGGAATTTACATTAGGTAGATCGGATTGGAGCTGTAAAGGATAG 1452 0.4463 MPLEGSFNIESTTNSPLPDLSLHIRPPNNNTCPSAQQGSRQDLITNCSAARSVIIGHAHTELSLGSSTLTSGGEEPYQAHGSSANNINNNNSFYNQVFKSQLHRHTHSNNSAAAHLNHIHRGVSLIEASSSSSSSTETASQSCLRPIKGIPVYHNRSFPFLPVDHSRESKESKMCLYHPMSPYSSLSSSCSSLCSPASPPINPPPYFSVNLDPRSSILNTGSNNVSPTCFRMSAGATAAAAARFNGPPPDVFKSHQLHHHSQYGFGPPDVSSGLMRSRFSPKLPAKRNMRAPRMRWTSTLHARFVRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGNSDGSGGEDEISPVGSAGDHLGLQYTDQSRPSDCFSQQDMMEDSNPGSTLWINSSSGREGWLQTSSNEADDLMALNLPIQQASGRNQIQEYHSTDQINSHLAESNLVSKNPSLEFTLGRSDWSCKG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00859 483 MobiDBLite consensus disorder prediction 345 402 - -
Pte18g00859 483 MobiDBLite consensus disorder prediction 66 88 - -
Pte18g00859 483 NCBIfam myb-like DNA-binding domain, SHAQKYF class 292 345 IPR006447 GO:0003677
Pte18g00859 483 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 480 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte18g00859 483 SUPERFAMILY Homeodomain-like 289 345 IPR009057 -
Pte18g00859 483 Gene3D - 291 348 - -
Pte18g00859 483 FunFam Myb family transcription factor 290 348 - -
Pte18g00859 483 MobiDBLite consensus disorder prediction 345 363 - -
Pte18g00859 483 MobiDBLite consensus disorder prediction 379 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00859 Pte-Chr18 20986991 20992573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00859 145 482 G2-like Transcription Factor Family AT5G16560 43.889 3.34e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte18g00859 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00859 - - vvi:100244905 406.757