Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00850 ATGGCTGGGAAGAAACTCAAGAAAGTGAAGTTAACGGATGATCGTGAGGAAGGAGAGAGGAAAAAGAAACTTAAAGCTTCTTCGTCTTCCACGTCTTCTTCTTCATCATCATATGATGAAAGGGATTATCAGGTTGAAGATGTGAAGGATCCAATCAAATCATCGAGAGGGAGTCGATTCAATCTGTTGGAGAACGAGTTAGGTTGGATTGGGTTGACACGGAGGAAGCTCAGCAGTCAATATTTGGTCGATGGCATCAAAGGGCTTTCCAGAGGCTCTGTAATTCATCCAGATAGCAGATGGTACAGACTATGGAACAAGTTCATACTAGTTTGGGCAATATACTCCTCATTCTTCACTCCTCTAGAGTTCGGATTCACGAGGGGGTTACCCAAGAAGCTTTTTATCTTAGACATTGCTGGACAGGTAGCTTTCCTTGTCGACATTGTTTTGCAGTTTTTTGTTGCGTACAGAGACGGACAGACGTACCGAATGGTCTACAAGCGTACCCCCATAGCTTTAAGATATTTGAAGTCTAGCTTTACCGTCGATCTTCTTGCATGCATGCCTTGGGATCTCATTTACAAGGTAATATTAGTCGCCTTCGTTCACCAAGTTGTTATTTTTAGTTTGTCATCATCGTCTATGAAACAGGCTTCCGGAAGAAGAGAAGAAGTGAGGTACCTTCTGTGGATCAGATTATGTAGGGTGCGGAAGTGCACCGACTTCTTTCAAAAGCTAGAAAAGGATATACGCATAAACTACATGTTTACCAGAATTGCCAAACTTTTAGCAGTTGAACTATACTGTACCCATACAGCCGCCTGCATCTTTTATTATTTGGCTACCACCCTTCCTGCCTCTCAAGAGGAGTACACGTGGATTGGAAGTTTAAAGCTGGGTAGTTATAGTTACTCACACTTCAGAGAAATGGATCTATCGAAGCGCTACATTACATCTTTGTATTTTGCAATTGTGACCATGGCTACTGTGGGTTATGGAGATATACACGCTGTCAATGTCAGAGAGATGATATTCATAATGATATATGTCTCTTTTGACATGGTTATTGGCGCTTATTTAATTGGTAATATGACAGCATTAATTGTGAAAGGATCCAACACAGAAAAATTTAGGGACAGAATGACAGATGTTATGAAATACATGAACAGAAACAGACTAGGCAGGGACATCCGCGATCAAATCAGAGGTCACTTGCGTTTACAGTATGAGAGAAGCTATACTAGTCCTGCTGTTCTTCAGGATATTCCCATTTCTATCCGGGCCAAGATATCACAACAATTATATTTGCCATACATTGAGAAGGTCTATCTCTTCAAAGATTGCTCCACGGAATTCATCAATCAGATTGTTATTAAAGTACATGAAGAATTTTTCCTCCCAGGAGAAGTGATAATGGAACAGGGGAATGTGGTAGACCAAGTCTACTTTGTCTGCAATGGTGTTCTGGAGGAAATAGCCACTGGGGAAGATGGATCTGACAATACTGTTGCTCTTTTAGAACCTGAAAGTGTTTTCGGAGAAATATCAATTCTTTGCAACATTCCTCAGCCATATACAGTCCGTGTTTGTGAACTATGTAGGCTACTTCGGCTTGATAAACAATCCTTTACTAACATCCTTGATATATACTTCTACGACGGGCGGAAAATATTGAACAACCTCTTGAAGGAAAAAGAATCAAATGATCGGGTCAAGTTATTGGAGATGGACATAACCTTTCATCTTGGAAAGCAGGAAGCTGAACTTGCGCTGAAGCTCAACAGTGCAGCTTATTATGGGGAACTGTATCAATTAAAAGGTCTAATTCGAGCTGGAGCTGATCCAAACAAGACTGATTATGATGGAAGGTCTCCATTGGTAGGAATCCTCTGA 1896 0.4093 MAGKKLKKVKLTDDREEGERKKKLKASSSSTSSSSSSYDERDYQVEDVKDPIKSSRGSRFNLLENELGWIGLTRRKLSSQYLVDGIKGLSRGSVIHPDSRWYRLWNKFILVWAIYSSFFTPLEFGFTRGLPKKLFILDIAGQVAFLVDIVLQFFVAYRDGQTYRMVYKRTPIALRYLKSSFTVDLLACMPWDLIYKVILVAFVHQVVIFSLSSSSMKQASGRREEVRYLLWIRLCRVRKCTDFFQKLEKDIRINYMFTRIAKLLAVELYCTHTAACIFYYLATTLPASQEEYTWIGSLKLGSYSYSHFREMDLSKRYITSLYFAIVTMATVGYGDIHAVNVREMIFIMIYVSFDMVIGAYLIGNMTALIVKGSNTEKFRDRMTDVMKYMNRNRLGRDIRDQIRGHLRLQYERSYTSPAVLQDIPISIRAKISQQLYLPYIEKVYLFKDCSTEFINQIVIKVHEEFFLPGEVIMEQGNVVDQVYFVCNGVLEEIATGEDGSDNTVALLEPESVFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLKEKESNDRVKLLEMDITFHLGKQEAELALKLNSAAYYGELYQLKGLIRAGADPNKTDYDGRSPLVGIL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00850 631 FunFam Potassium channel SKOR 103 370 - -
Pte18g00850 631 Pfam Ion transport protein 103 369 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte18g00850 631 ProSiteProfiles cAMP/cGMP binding motif profile. 445 565 IPR000595 -
Pte18g00850 631 MobiDBLite consensus disorder prediction 1 44 - -
Pte18g00850 631 SUPERFAMILY cAMP-binding domain-like 373 563 IPR018490 -
Pte18g00850 631 SMART cnmp_10 445 563 IPR000595 -
Pte18g00850 631 SUPERFAMILY Voltage-gated potassium channels 96 370 - -
Pte18g00850 631 PRINTS EAG/ELK/ERG potassium channel family signature 115 122 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte18g00850 631 PRINTS EAG/ELK/ERG potassium channel family signature 269 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte18g00850 631 PRINTS EAG/ELK/ERG potassium channel family signature 138 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte18g00850 631 PRINTS EAG/ELK/ERG potassium channel family signature 361 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte18g00850 631 PRINTS EAG/ELK/ERG potassium channel family signature 317 334 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte18g00850 631 MobiDBLite consensus disorder prediction 1 26 - -
Pte18g00850 631 Gene3D - 583 629 IPR036770 -
Pte18g00850 631 Gene3D Helix hairpin bin 372 428 - -
Pte18g00850 631 PANTHER POTASSIUM CHANNEL AKT1 80 628 IPR045319 GO:0005249|GO:0006813
Pte18g00850 631 CDD CAP_ED 445 559 IPR000595 -
Pte18g00850 631 Gene3D Jelly Rolls 429 569 IPR014710 -
Pte18g00850 631 FunFam Potassium channel KAT2 433 570 - -
Pte18g00850 631 Gene3D - 104 371 - -
Pte18g00850 631 Pfam Cyclic nucleotide-binding domain 465 549 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00850 Pte-Chr18 20931866 20939823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00850 36 628 Ion Channels AT3G02850 71.933 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00850 K21867 - cave:132183027 931.398