Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00849 ATGGACAAGAGCAAGAACAAGGCATTGTTTCGTGCGAAACTGAATGCTCAGAAGAAAGACAAGCGTATAGATTCTCCTCTTGTAAGGTACAATGAACTTGATCACCCTGTTTGTAAAATATGTGAAATTGATTTTAAATTCGAGTCACTTTGGGATGCACATCAAGCTTCTCGGAAGCATCACGAGGCTATAACTCAACTGAAAGCAAATGCTGCTGGACAAACCCGGAAAATTAGTGCAAACTCCATCTCACAAGCCAAATCTGAAGCTTCAGTTGGGTTGCCTTCAAGGAAACCTGAAAGCTCAAAAGACTTGCCAACATCTTGTTCACCATCAGTTCTTCCTCAAGATTTTTTTGACAACAACGAAGCAAAACAGCAGAAATCAATCAAATCAGCTGAGCAGGATTTATCAAAAAGATCAGGGGGTTCCACTCAAATTGAGGCATCATCAAAGGAGACAGGTGGATTGCACAGTCATAGTGCTACAGGTTTAGAAAGTGCACGTGCTAAAGCTTCTGCAGAGAATGGGAACAGATCAGTGCAAGCTACTCAAATAGATCCCAAGCAAGTGAAGAGTGTTCTGCCTGCAGGTTTCTTTGACAACAAGGAAGCTGATTTACGTGCACGTGGTGTAAAGCTTGTTAAGCCAGATATAAAGGATGAGTACAAGGAATACGAAAAGTTGATTCAAGAGGATTTGCAGGAGGTTGATAATCGTCTGGAAGAAGATGAGATCGATGCAGCAGAGATGATTGAAGAAGAAGAGTCTATTGAGCAAAAATCTTACAGGGAGAAAGTTGAAATGTTGAAGAGGAAGAGAATAGAAATGAAGGCTGCGAAGTCTGCCAAAAGCACTAATTCTTCGGAAGTTGCAAAAAATGGTTATAGCCCAAGAGAGTCATCCAGTGATGATGACAGTCAAGAGAATTTCACTGTTGATTGGAGAGCACAACATTTGTGA 963 0.4112 MDKSKNKALFRAKLNAQKKDKRIDSPLVRYNELDHPVCKICEIDFKFESLWDAHQASRKHHEAITQLKANAAGQTRKISANSISQAKSEASVGLPSRKPESSKDLPTSCSPSVLPQDFFDNNEAKQQKSIKSAEQDLSKRSGGSTQIEASSKETGGLHSHSATGLESARAKASAENGNRSVQATQIDPKQVKSVLPAGFFDNKEADLRARGVKLVKPDIKDEYKEYEKLIQEDLQEVDNRLEEDEIDAAEMIEEEESIEQKSYREKVEMLKRKRIEMKAAKSAKSTNSSEVAKNGYSPRESSSDDDSQENFTVDWRAQHL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00849 320 Coils Coil 223 261 - -
Pte18g00849 320 SUPERFAMILY beta-beta-alpha zinc fingers 30 74 IPR036236 -
Pte18g00849 320 PANTHER UNCHARACTERIZED 1 320 IPR040050 GO:0003676|GO:0005681|GO:0008270
Pte18g00849 320 MobiDBLite consensus disorder prediction 136 161 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 101 126 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 281 298 - -
Pte18g00849 320 Pfam Zinc-finger of C2H2 type 38 60 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 277 320 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 70 91 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 70 187 - -
Pte18g00849 320 MobiDBLite consensus disorder prediction 173 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00849 Pte-Chr18 20878322 20884975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00849 1 321 C2H2 Transcription Factor Family AT3G02860 51.376 1.13e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00849 K13104 - jre:108988013 328.176