Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00841 ATGTCTGCACCATCTTTGAAGCAGTTCAACGTTTCATTCAATATGCTAAACGGGTCTATTCCTGCGAAATTTTCGGAGTTGGATGCCAGTTCTTTTGAGGGAACTTCTCTTTGTGGGAAACCATTGCAACCTTGCAATGGAACTGAGACAAACGGTGGGAAAAGGAAATTATCTGGTGGAGCAATTGCAGGAATTGTGATTGGTTCTGTCATTGGATTACAGTTGATCATTGCCATTTTGATTTTTGTTAGCAGAAGCATGAGTAAAAGAAATACATCTTCGGACAAGGCCGGTGATGTTGTAATACCTGCCCAACCATCACATAGGGCGGTTGGCGGCCGTGAGGATGTAAGTGCTGAGTATTCTTCAACGGAAAGAGCAGAAGGTAAGAGTAGTGGGAGTGATGGTTTGGCGTTCTTTGCCAATGTTGGAAAGGCCTTTGATTTGGAAGATTTATTGCGGGCATCGGCGGAAGTATTAGGGAAGGGGACTTTTGGAACAACATACAAGGCCACTTTGGAAATGGGGACAATGGTAGCTGTGAAGAGGTTGAAGAAAATCACTGCATCTGAGAAAGAATTCAGGGAGAAGATGAAAGATGTGGGAAAGATAGTTCATGAGAATCTAGTTTCGCTTAAGGGATACTATTTTGGCAAAGAAGAGAAGCTTCTTGTTTATGATTACTTACCTATGGGGAGTTTATCTGCACATCTACATGGATACAATGGAGAAGATAGAACTCCCCTAAACTGGGAAGTTAGGTGTAGAATAGCCTATGGAGCTGCTCGTGGAATTGCATACCTACACTCGCAAAGGTCAGCAGTCTCCCATGGAAACATCAAGTCCTCTAACATTCTCCTCACCAGGTCCTATGAAGCTCGAGTTTCTGATTTTTGCCTTTCTCATCTTGCACTTCCAAGTTCAAGTCCCGCTGGTGTTTCCAGTTACCGTGCTCCGGAAGTTACAGATACGCAAAAAGTATCCCAGAAAGCAGATGTTTATAGCTTTGGTGTCATTCTGTTAGAGTTACTCACTGGAAGGCCTCCTACTCACTCCTTGCTGACTGAGGAAGGAGTAGACCTGCCAAGATATGTTCAATCTTTGGTTCGTGAAGAATGGAACACTGAGGTGTTTGACATGGATCTTCGTCGTCGGGACTATAATGATGTTGAGGAGGAAATGATTCAGCTCCTGCAGCTTGCACTTGAATGCACAGCGCAACATCCTGACACACGTCCTTCAATGGATGTAGTGGTTTTCAGAATGGAGGGTCTTTGTCATTCAAGTTTACATAAGAATCCAGATAAAAATGATTCGTTCCAAGATGCAGAGGATGGGGCCTCACAGCGGTATTACTCAGCAGATTCCATGGCAGCCCCATCCTCCTCAGAATAG 1395 0.4416 MSAPSLKQFNVSFNMLNGSIPAKFSELDASSFEGTSLCGKPLQPCNGTETNGGKRKLSGGAIAGIVIGSVIGLQLIIAILIFVSRSMSKRNTSSDKAGDVVIPAQPSHRAVGGREDVSAEYSSTERAEGKSSGSDGLAFFANVGKAFDLEDLLRASAEVLGKGTFGTTYKATLEMGTMVAVKRLKKITASEKEFREKMKDVGKIVHENLVSLKGYYFGKEEKLLVYDYLPMGSLSAHLHGYNGEDRTPLNWEVRCRIAYGAARGIAYLHSQRSAVSHGNIKSSNILLTRSYEARVSDFCLSHLALPSSSPAGVSSYRAPEVTDTQKVSQKADVYSFGVILLELLTGRPPTHSLLTEEGVDLPRYVQSLVREEWNTEVFDMDLRRRDYNDVEEEMIQLLQLALECTAQHPDTRPSMDVVVFRMEGLCHSSLHKNPDKNDSFQDAEDGASQRYYSADSMAAPSSSE* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00841 464 Gene3D Phosphorylase Kinase; domain 1 120 228 - -
Pte18g00841 464 FunFam pollen receptor-like kinase 1 123 228 - -
Pte18g00841 464 SUPERFAMILY Protein kinase-like (PK-like) 158 420 IPR011009 -
Pte18g00841 464 CDD STKc_IRAK 160 425 - -
Pte18g00841 464 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Pte18g00841 464 PANTHER OS05G0588300 PROTEIN 4 432 - -
Pte18g00841 464 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 229 436 - -
Pte18g00841 464 MobiDBLite consensus disorder prediction 106 131 - -
Pte18g00841 464 Gene3D Ribonuclease Inhibitor 1 53 IPR032675 -
Pte18g00841 464 ProSiteProfiles Protein kinase domain profile. 154 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00841 464 Pfam Protein kinase domain 157 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00841 464 MobiDBLite consensus disorder prediction 431 464 - -
Pte18g00841 464 Gene3D Transferase(Phosphotransferase) domain 1 229 450 - -
Pte18g00841 464 CDD TM_EphA1 55 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00841 Pte-Chr18 20794213 20796047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00841 6 425 Receptor kinase-like Gene Family AT1G48480 53.982 3.37e-155 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g00841 Pkinase 3.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00841 - - qsa:O6P43_020574 567