Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00821 ATGAAGAGAGATCACCGAGAAGCCTATGGTGGTGGTAGGAGTAGCAGTGTTGGCTATAGCAGCACATGTAATGCTACCAGTGCTGCAAAAACGGACGGCTCACCTGTGTCAAGTAGTAAGATAAAGATGTGGGGACAAGAAGAACCTGAAGCTAGCGGAATGGATGAGCTGCTTGCTGTTTTGGGTTACAAGGTTCGGTCTTCCGACATGGCTATGGTGGCTCAGAACCTCGAGCAGCTTGAAATGGTCATGGGTTCAGCTCAAGAAGACGGGATTTCGCACCTAGCTTCTGATACCGTTCACTACGACCCTTCTGATATGTCTGCTTGGGTTCAGAGTATGCTATCAGAGCTCAACAATTCACCTGACTCTATCTTAGATCCAGCTGAATCTTCCAGTATTACAGCCACCTTCAATTTCTCAAATTCCAAGCAACAAATTGACTCCCACTCCCAAGTTTCTACCGATGACTCTGAGTATGATCTCAGAGTAATCCCTGGTGTCGCGGCGTACCCACGAAGTGACCTCACCTCCGAAAGCGAAACAAGTCGAAAACGATATAGAACTTCAATGGGGTCTTCCAATTCCGTTCAATGTTTACCTTCTTCTCCATCACCATCACCGGTGGCGGTGTCTTCAGCCAGCGCGTCTGAGCCAACTCGTCCAGTTGTGCTACTCGACTCACAGGAAGCCGGTGTCAGACTCGTTCACACTCTTTTGGCCTGTGCAGAAGCTGTTCAGCAAGACAACCTGAAACTTGCAGATACGCTCGTGAAGCACGTAGGCATGCTTGCTGCTTCTCAAGTGGGCGCAATGAGAAAAGTCGCTACCTACTTTGCTCAAGCTCTAGCTCGTCGAATATACAGGTTGTACCCAACACAAGATTTTTCGGACTCTACTTGCTCCGATCTCCTTGAGATGCACTTCTACGAGTCCTCCCCTTACCTCAAATTCGCTCACTTCACGGCCAACCAAGCCATACTTGAAGCTTTCGCCACGTCTAGCAGAGTCCATGTGATCGATTTCGGTCTCAAGCAAGGTATGCAATGGCCGGCCCTAATGCAAGCTCTTGCATTGCGACCCGGTGGTCCACCGGCATTTCGATTAACCGGAATTGGACCGCCTCAGCCGGACAACACCGATGCTCTGCAACAAGTGGGTTGGAAATTAGCTCATTTAGCTGAAACCATAGGTGTCAAGTTCGAGTTCCGTGGGTATGTTTGCAACAGTTTGGCGGATCTCGAACCGTCCATGCTGGAGATCCGACCGGCTGAGGTAGAGACTGTTGCAGTCAATTCCGTTTTTGAGCTCCACCGATTATTGGCCCGACCCGGCGCAAGCGAAAAGGTGCTGGATTCAATCAAAGCCATGAAGCCTAAGATTGTGACTGTCGTAGAACAAGAAACGAATCACAACGGGCCGGTTTTCCTAGACCGGTTTACCGAAGCATTGCATTATTACTCGACCTTGTTTGACTCGTTGGAAGGATCGTCTTCAGGGGTGAGTCCAACGAGCCAAGACTTGGTGATGTCTGAACTTTACCTGGGTAGTCAGATATGCAACGTGGTAGCCTGTGAAGGTCCAGAGCGAGTTGAAAGGCACGAGACTTTGAGTCAATGGAGAGAAAGAATGGGTTCGGCCGGGTTTGACCCGGTTCACCTTGGATCCAACGCTTTCAAGCAGGCTAGCATGTTGTTGGCACTCTTTGCAGGCGGTGACGGATACCGAGTAGAAGAAAACAACGGGTGTCTCATGCTTGGATGGCACACACGACAGCTCATCGCCACTTCAGCCTGGCGAATCGCCGAGTGA 1812 0.5017 MKRDHREAYGGGRSSSVGYSSTCNATSAAKTDGSPVSSSKIKMWGQEEPEASGMDELLAVLGYKVRSSDMAMVAQNLEQLEMVMGSAQEDGISHLASDTVHYDPSDMSAWVQSMLSELNNSPDSILDPAESSSITATFNFSNSKQQIDSHSQVSTDDSEYDLRVIPGVAAYPRSDLTSESETSRKRYRTSMGSSNSVQCLPSSPSPSPVAVSSASASEPTRPVVLLDSQEAGVRLVHTLLACAEAVQQDNLKLADTLVKHVGMLAASQVGAMRKVATYFAQALARRIYRLYPTQDFSDSTCSDLLEMHFYESSPYLKFAHFTANQAILEAFATSSRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAHLAETIGVKFEFRGYVCNSLADLEPSMLEIRPAEVETVAVNSVFELHRLLARPGASEKVLDSIKAMKPKIVTVVEQETNHNGPVFLDRFTEALHYYSTLFDSLEGSSSGVSPTSQDLVMSELYLGSQICNVVACEGPERVERHETLSQWRERMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRQLIATSAWRIAE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00821 603 ProSiteProfiles GRAS family profile. 226 600 IPR005202 -
Pte18g00821 603 MobiDBLite consensus disorder prediction 187 214 - -
Pte18g00821 603 Gene3D - 53 118 IPR038088 -
Pte18g00821 603 Pfam GRAS domain family 235 600 IPR005202 -
Pte18g00821 603 MobiDBLite consensus disorder prediction 173 214 - -
Pte18g00821 603 Pfam Transcriptional regulator DELLA protein N terminal 55 122 IPR021914 -
Pte18g00821 603 MobiDBLite consensus disorder prediction 14 39 - -
Pte18g00821 603 MobiDBLite consensus disorder prediction 1 39 - -
Pte18g00821 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 176 596 IPR005202 -
Pte18g00821 603 SMART DELLA_2 55 128 - -
Pte18g00821 603 FunFam DELLA protein GAI 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00821 Pte-Chr18 20094507 20096613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00821 40 602 GRAS Transcription Factor Family AT1G14920 61.634 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte18g00821 GRAS 5.2e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00821 K14494 - qsa:O6P43_020590 879.782