Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00820 ATGGTCATTGCTGTCAAGAGGCTTAATCAAGAAGGCCTGCAGGGTCACAGCGAATGGCTGACTGAGATCAACTACCTGGGACAGCTACATCATCCTAATCTTGTGAAAATGATAGGTTACTGCTTAGAGGATGACCAGAGACTGTTGGTTTATGAATTTTTACCCAAGTGTAGTTTGGACAATCACTTGTTCAGGAGAGCTTCTTACGTTCAACCTCTTTCTTGGAACCTCCGGATGAAGATTGCATTTGATGCTGCAAAAGGTCTTGCCTTTCTTCACAGCGATAAAGCCAAAGTGATATATAGAGACTTGAAAACTTCTAACATATTGCTTGACTCGAATTACAATGCAAAGCTCTCTGATTTTGGATTGGCAAAGGATGGACCCCCGGATGATAAAAGTCACGTCTCTACTAGGGTCATGGGAACTTATGGCTACGCAGCTCCTGAATATATGGCCACAGGTCATCTGACTAAGAAAAGCGATGTATACAGTTTTGGCGTTGTCCTCCTGGAAATTTTAGCTGGGAGAAGAGTTTTGGACAAAAACAAACCACCTGGGGAGCATAATTTAGTTGAATGGGCCAGGCCTTACCTTACCAGCAAACGCAGGATCTTCAGAGTTATGGATGTTCGTATGGAAGGTCAGTATTCAATGAGTGAAGCATTAAAGGCAGCTGATCTAGCCATTCGATGCCTCTGTATAGAACCCAGGTTTAGGCCTGATATGAATGAAATCGTAAGAACATTGGAACAGCTTCAGAACTCTAATCGTACAGGTGAATTAGGTGGCTCCAAAAATCAGACATATCAAAATAAGAGTGAGGATCATCATTCCAGCAATGCTGACAGACATCGAAGGCGAAGTATCAATGAATCTTCCAACAGGGCAGTTAATTCTCATCACAAACCATCTGTTGTGCTTCATACATGA 933 0.4255 MVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKMIGYCLEDDQRLLVYEFLPKCSLDNHLFRRASYVQPLSWNLRMKIAFDAAKGLAFLHSDKAKVIYRDLKTSNILLDSNYNAKLSDFGLAKDGPPDDKSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEILAGRRVLDKNKPPGEHNLVEWARPYLTSKRRIFRVMDVRMEGQYSMSEALKAADLAIRCLCIEPRFRPDMNEIVRTLEQLQNSNRTGELGGSKNQTYQNKSEDHHSSNADRHRRRSINESSNRAVNSHHKPSVVLHT* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00820 310 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00820 310 Gene3D Transferase(Phosphotransferase) domain 1 54 279 - -
Pte18g00820 310 PANTHER OS01G0588500 PROTEIN-RELATED 2 254 - -
Pte18g00820 310 SMART serkin_6 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00820 310 MobiDBLite consensus disorder prediction 271 292 - -
Pte18g00820 310 SUPERFAMILY Protein kinase-like (PK-like) 2 251 IPR011009 -
Pte18g00820 310 FunFam Probable serine/threonine-protein kinase PBL8 54 271 - -
Pte18g00820 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Pte18g00820 310 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00820 310 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Pte18g00820 310 MobiDBLite consensus disorder prediction 257 310 - -
Pte18g00820 310 PIRSF ILK 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00820 Pte-Chr18 20080193 20083804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00820 1 250 Glycoside Hydrolase AT3G07070 53.175 4.69e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte18g00820 Pkinase 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00820 - - gmx:100775335 461.455