Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00810 ATGCCGAGACGCTCAGCAGCGTATCCATCGATCACCGGAATAGCGATCCCTTTTGATAGTTCAATTATTGTCATGGAGCTCCAAATCCCTCATTATATCGTCTACACTTTCTTCTTTATATTGTTCGCGAGAATACTCATAGCCAAAATATCTCAGCACTCAACAAAAAAATTGCCTCCAGGACCATGGAAACTGCCGGTGATTGGAAACATCCACCAGCTTCTTGGTTTACCAACACATCAAGCCCTGAGACACTTATCAAGAAAATATGGGCCATTGATGCATCTGCAGTTAGGAGCGGTCTCCAACATTGTAGTTTCATCACCAGAAATGGCCAAAGAAGTTTTGAGAACACATGATGCCATACTGGCGAATAGACCTGTTATTCTTATGTCCAAAATCATGTGTTATGATTCTACAGACATAGTCTTTTCTCAGCTTGGAGCTTATTGGAGACAGCTTAGGAAAATTTGCACGACTGAGCTGTTAAGTGCAAAGCGTGTGCAGTCATATCGGTCCATAAGGGAAGAGGAGGTGTCAAAATTCATTGAAATGATATCATCCAATGAAAAATCAATTGTGAATTTGTCTGAGAAGATTTTCTCGTTGACATATGGGATAACAGGAAGAGCAGCCTTTGGTAAGAAATGCAAAGACCAAGAAGCATTCATATCAGTTATCAAAGAAGCAGTGGAGCAGGCTGGAGCATTTTCTATTGCTGATTTCTACCCTTCTAGTAAATTGCTTGAGATCATCAGTGGAGTAGGACCTAAACTTGAGAGGCTACACAAAGAAGGTGATAGGATACTCGGACACATCATCAGAGATCACAAAGAGAGCAAAAGGCCCAACGATGATGAATCCGAGGAAGATTTCGTTGATGTTCTTTTGAGGTGCCAAGAGCAAAATGATCTGGAAGTCCCTTTGACTGAACAAAACATCAGAGCTGTCATACATGATATTTTCAGTGCTGGGAGTGAAACATCATCTACAACTATAGAATGGGCACTGTCAGAAATGCTTAAAAACCCTTCAACAATGGCAGAGGCACAAGCTGAGGTGAGAAGGGTCTATGACAAGAAAGGATATGTAGATGAATCGAACATTCATGAATTGATGTACTTAAACTCTGTGATCAAAGAAACTCTGCGGCTACACCCACCTGCACCACTGTTGATACCGAGAGAAACCAAAAAGGCATGCAAAATCACACAATATGAGATTCCTGCAAAAACTAGGATCATCATTAACTCTTGGGCAATTGGAAGAGACCCAGAATATTGGACTGAAGCAGAGAAGTTTCTGCCAGATAGGTTCCTAAATAGTCCAATTGATTACAAAGGCACAGACTATCGATACATTCCCTTCGGTGCTGGAAGGAGAATATGCCCTGGGATTATATTTGGCATAGCCAACATTGAGCTGCCACTTGCAAATTTGCTTTACCATTTTGATTGGAGACTCCCAAATGGTATGAAGCATGATGATCTGGACATGACTGAGTCGCCTGGTATTACAGTAAGAAGGAAAGAAGATCTATGCTTGATTCCAAGTCGGTACCACTTATCACATTCACTTGAAAATACCATCTAA 1593 0.4124 MPRRSAAYPSITGIAIPFDSSIIVMELQIPHYIVYTFFFILFARILIAKISQHSTKKLPPGPWKLPVIGNIHQLLGLPTHQALRHLSRKYGPLMHLQLGAVSNIVVSSPEMAKEVLRTHDAILANRPVILMSKIMCYDSTDIVFSQLGAYWRQLRKICTTELLSAKRVQSYRSIREEEVSKFIEMISSNEKSIVNLSEKIFSLTYGITGRAAFGKKCKDQEAFISVIKEAVEQAGAFSIADFYPSSKLLEIISGVGPKLERLHKEGDRILGHIIRDHKESKRPNDDESEEDFVDVLLRCQEQNDLEVPLTEQNIRAVIHDIFSAGSETSSTTIEWALSEMLKNPSTMAEAQAEVRRVYDKKGYVDESNIHELMYLNSVIKETLRLHPPAPLLIPRETKKACKITQYEIPAKTRIIINSWAIGRDPEYWTEAEKFLPDRFLNSPIDYKGTDYRYIPFGAGRRICPGIIFGIANIELPLANLLYHFDWRLPNGMKHDDLDMTESPGITVRRKEDLCLIPSRYHLSHSLENTI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00810 530 CDD CYP71-like 89 513 - -
Pte18g00810 530 Gene3D Cytochrome P450 51 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PANTHER OS08G0105600 PROTEIN 82 520 - -
Pte18g00810 530 SUPERFAMILY Cytochrome P450 59 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Pte18g00810 530 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 Pfam Cytochrome P450 59 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00810 530 FunFam Cytochrome P450 71D8 51 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00810 Pte-Chr18 19943968 19948718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00810 32 520 Cytochrome P450 AT3G26300 40.519 2.29e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00810 - - qsa:O6P43_021270 651.744