Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00805 ATGGCTGGAATTTGCTGCGGTGTTGTTGGAGAAGGAGAGGCAGCAGCTCATGTAGAACCCATTTCACGAACATCAAGACGTCGTAGTTTTGAATTGCTACAGTTGAAGTATATGGCTACCGAAGTCGTTGTACCAACAGCTCCTCTAGGCCGTCGTAAACGCCAGAACAGTTCGAATCGCAGCTTTGAGTCAGTCTCACCCACCAGACTGTGTGACAACGTGGTTGATAGTTGTGAACCGATTGTAGATGAGAACGACGCGGATATGCTAGTTTCGCGAAGAAGAGGCGCTTGCTCGAACTCGATACCTTTGGATGACTCTCCAAAATTTGGCGTTACCTCTATTTGCGGTAGGAGGAGAGAAATGGAAGACGCTGTTTCAGTTCGTCCATCCTTTTGCGAAGAGCGGGAGGGACTTGGAAAATGGTTTAATTTCTACGGTTTATACGATGGCCATGGTTGCTCTCATGGAGCCGATATGTGCAAGGATAGACTGCACGAGATAGTGAAGGAAGAGGTCGGAGTAGCGGGAGAAGCAAGCTTGGATTGGAAAGATGTGATGGAGAAAAGCTTCGCTCGTGTGGACGATGAAGTTTCTGACTCGGCTAATACTGTGCAGAGCTCCAGTTGCAAATGTGAGCTACAGGCTCCACACTGTGAAGCCGTTGGATCTACCGCCGTTGTAGCCGTCGTTACGCCTGATAAGATTGTAGTCTCCAACTGCGGCGACTCACGTGCCGTTCTCTGCCGAAATGGCGTCGCTGTTCCACTATCTTCCGACCACAAGCCCGACCGACCCGATGAATTGCTCCGAGTTGAAGCCGCAGGTGGTCGTGTCATATATTGGGATGGGCCACGTGTTCTCGGAGTCCTCGCCATGTCCAGAGCAATCGGTGACAGTTATCTAAAACCGTATGTAATATCTGAACCGGAGGTGACGATTACAGATCGGACTGTGGAGGACGAATGTCTGATCTTGGCAAGTGATGGGTTGTGGGATGTGGTATCAAACGAGACCGCATGCAATGTCGTACGCATGTGCCTTAGGGCCCAGAAGCGATCGCCGCCATCTGAATCTCCTGGAGAGGATGATATGCGTTTTGGGTCGCGAACCGATAGTTCAGACAAGGCATGCTCTGATGCATCTATGTTGTTAACGAAGTTGGCTCTGGCTCGTCATAGCACAGATAATGTGAGCGTGGTGGTTATCAATTTGAAAAGAGGTCAAGCTCCGAAGCAACGGCATTGA 1248 0.5008 MAGICCGVVGEGEAAAHVEPISRTSRRRSFELLQLKYMATEVVVPTAPLGRRKRQNSSNRSFESVSPTRLCDNVVDSCEPIVDENDADMLVSRRRGACSNSIPLDDSPKFGVTSICGRRREMEDAVSVRPSFCEEREGLGKWFNFYGLYDGHGCSHGADMCKDRLHEIVKEEVGVAGEASLDWKDVMEKSFARVDDEVSDSANTVQSSSCKCELQAPHCEAVGSTAVVAVVTPDKIVVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRVEAAGGRVIYWDGPRVLGVLAMSRAIGDSYLKPYVISEPEVTITDRTVEDECLILASDGLWDVVSNETACNVVRMCLRAQKRSPPSESPGEDDMRFGSRTDSSDKACSDASMLLTKLALARHSTDNVSVVVINLKRGQAPKQRH* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00805 415 MobiDBLite consensus disorder prediction 351 376 - -
Pte18g00805 415 MobiDBLite consensus disorder prediction 356 373 - -
Pte18g00805 415 SUPERFAMILY PP2C-like 108 406 IPR036457 -
Pte18g00805 415 PANTHER PROTEIN PHOSPHATASE 72 405 IPR015655 GO:0004722|GO:0006470
Pte18g00805 415 Pfam Protein phosphatase 2C 110 397 IPR001932 -
Pte18g00805 415 SMART PP2C_4 99 403 IPR001932 -
Pte18g00805 415 FunFam Probable protein phosphatase 2C 9 104 409 - -
Pte18g00805 415 Gene3D - 104 412 IPR036457 -
Pte18g00805 415 CDD PP2Cc 109 405 IPR001932 -
Pte18g00805 415 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Pte18g00805 415 ProSiteProfiles PPM-type phosphatase domain profile. 109 405 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00805 Pte-Chr18 19817344 19820329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00805 105 415 PP2C-type Phosphatase Gene Family AT1G07430 59.394 2.46e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00805 K14497 - qsa:O6P43_020642 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00805 18 19817344 19820329 Pte18g00805 18 19817344 19820329 RCT