Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00797 ATGGCTTCACAAGGACAGGTGGGTATGGACCCTGCTGTGCTGGATGATATCATCAGGAGGCTGACGGAAGTCCGACTAGCAAGACCCGGAAAGCAGGTTCAGCTGTCTGAGTCTGAGATCAAGCAGCTGTGTGTTCTTTCCAGAGACATATTTCTTCAACAGCCTAATTTGCTTGAACTCGAGGCACCCATCAAGATTTGCGGTGATATTCATGGGCAGTACAGCGACCTATTAAGGCTCTTCGAGTATGGAGGATTTCCACCTAATGCAAATTACCTTTTCCTGGGAGACTACGTGGATCGTGGCAAGCAGAGTTTGGAGACTATATGCCTTCTGCTTGCCTATAAGATTAAATATCCTGAGAACTTTTTTCTACTTAGGGGCAATCACGAATGTGCATCTATTAATAGGATATATGGATTCTATGATGAATGTAAGCGTCGATTTAATGTGAGGCTGTGGAAGACCTTCACAGATTGCTTTAATTGTCTTCCTGTTGCAGCCCTTATAGATGACAAAATTTTGTGCATGCATGGAGGTCTTTCTCCAGAACTTAAAAATCTAGATCAAATTAGAGAACTGGCTCGTCCAACTGCTATTCCAGACACTGGTTTGCTATGTGATTTGCTTTGGTCAGATCCAGGTAGAGAAGTGAAGGGATGGGGTGTGAATGATAGAGGAGTCTCATACACATTTGGCCCTGATAAGGTGGTAGAATTTTTGACAACGCAAGATTTGGACCTTGTCTGTCGTGCTCATCAGGTTGTGGAGGATGGATATGAATTCTTTGCGGACAGGCAACTTGTCACTATATTTTCAGCACCTAATTACTGTGGTGAATTTGATAATGCTGGTGCAATGATGAGTGTCGATGAAAACTTGATGTGCTCCTTCCAGATTCTTAAGCCTGCAGAGAAAAAAACGAAGTTTCTGATGTCAAACAAAATATGA 951 0.429 MASQGQVGMDPAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVLSRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDDKILCMHGGLSPELKNLDQIRELARPTAIPDTGLLCDLLWSDPGREVKGWGVNDRGVSYTFGPDKVVEFLTTQDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKFLMSNKI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00797 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Pte18g00797 316 FunFam Serine/threonine-protein phosphatase 61 314 - -
Pte18g00797 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Pte18g00797 316 SUPERFAMILY Metallo-dependent phosphatases 23 309 IPR029052 -
Pte18g00797 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 307 - -
Pte18g00797 316 CDD MPP_PP1_PPKL 13 303 - -
Pte18g00797 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Pte18g00797 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Pte18g00797 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Pte18g00797 316 Gene3D - 6 314 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00797 Pte-Chr18 19641796 19645480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00797 64 251 Calmodulin-binding Proteins AT5G63870 32.589 5.58e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00797 K06269 - fve:101309292 611.683