Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00782 ATGTCGGACGCTTTGATCAATGGTCTGGCCGGAGCTGGAGGAGGCATCATCGCCCAGCTCATCACATACCCTCTTCAAACTGTAAATACTCGACAACAAACTGACCGTGATCCGGAGAAAGAGAAGAGGAAGCTTGGTACCATTGAACAGATGTGTCAGGTTGTTAAACAAGAAGGTTGGGAACGCTTGTATGGAGGTTTGACGCCATCTTTGGTCGGCACAGCTGCATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGGATAAGGCTGAGGCAGCCGCACTTAAACAAAAAGGGAAAGGCTTTGGGGATGGATCAGTAGGAATATTTTCCTCACTTGTTGTTGCCGCTTTATCTGGGTGTGTGAACGTGCTATTGACAAATCCCATATGGGTGGTTGTCACACGCATGCAGACTCACAGGAAAGTTGCAAAGGGAAACCAAGCAGACAAGGCACCATCCATCACCACGGAAGGAGTTGTCTCAGTTGTTGAGCCCATTACATATGGAACTAACCATGCGATTCAAGAACTGTATGATGAAGCTGGAATTCGTGGTTTCTGGAAAGGTGTAATCCCGACATTGATCATGGTGAGCAATCCTTCTATACAATTTATGTTGTATGAAACAATGTTAAAGGAGTTGAAGAAAAAGCGTGCTTTACGGAAAAAGGGTTCTAACACAGTAACAGCCTTTGAGGTATTTCTTCTGGGTGCCCTTGCTAAACTTGGAGCTACTGTTGGTACTTATCCTCTTCTGGTTGTGAAGTCAAGACTTCAAGCAAGACAGGTAGCAGGAAGAGATAAAATGCATCACTATAAAGGCACTCTGGATGCTATTTTAAAGATGATCCGCTATGAAGGACTTTATGGATTTTACAAAGGGATGAGCACAAAAATTGTACAGAGCGTGTTGGCTGCTGCCGTTCTGTTCATGGTCAAGGAAGAACTTGTTAAGGGTGTTCGGTTGTTGCTTACGGAAGTTGGCGTTAGCACTCCTAAAGCATAG 1014 0.4428 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPEKEKRKLGTIEQMCQVVKQEGWERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEAAALKQKGKGFGDGSVGIFSSLVVAALSGCVNVLLTNPIWVVVTRMQTHRKVAKGNQADKAPSITTEGVVSVVEPITYGTNHAIQELYDEAGIRGFWKGVIPTLIMVSNPSIQFMLYETMLKELKKKRALRKKGSNTVTAFEVFLLGALAKLGATVGTYPLLVVKSRLQARQVAGRDKMHHYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFMVKEELVKGVRLLLTEVGVSTPKA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00782 337 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 328 IPR044712 GO:0006862|GO:0055085
Pte18g00782 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Pte18g00782 337 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Pte18g00782 337 Pfam Mitochondrial carrier protein 231 320 IPR018108 -
Pte18g00782 337 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Pte18g00782 337 SUPERFAMILY Mitochondrial carrier 3 318 IPR023395 -
Pte18g00782 337 Gene3D Mitochondrial carrier domain 9 325 IPR023395 -
Pte18g00782 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 322 IPR018108 -
Pte18g00782 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 216 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00782 Pte-Chr18 19487357 19491475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00782 24 324 Chloroplast and Mitochondria Gene Families AT1G25380 26.974 2.13e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00782 K13354 - tcc:18585941 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00782 18 19487357 19491475 Pte18g00782 18 19487357 19491475 RCT