Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00780 ATGCCTTCTCTCAGCCTCGTTTCCAAGTGCAGTGTCTTCCCTGACCAAAAATCCACACTTGGAGACCTCAAGCTCTCTGTCTCAGACCTACCCATGCTTTCCTGTCACTACATCCAAAAGGGTTGCCTCTTCACTCGTCCTTCTCTTCCTTTACACTCTTTTTCCTTACTTCTCAAGACTTCTCTCTCCAGAACACTCTCTATTTTCCCACCTCTCGCTGGCCGCCTCAAAACTGATTCTAGTGGCTACGTCTACATCACCTGCAACGACGCCGGCGTTGAATTCGTCCTAGCTAGTGCAAGCGGACTATACATCCGCGACATTCTGGCTCCTACTCACGTGCCTGACTGTGTCAAACAGTTCTTCGTGTTTGACCAGACTGTGAGTTACGCAGGCCATTTTCAACCCATTCTGGCTGTTCAGGTCACGGAGCTCGCCGATGGCATCTTCATAGGTTGTACCGTCAACCATGCCGTTGTAGATGGCACGTCCTTCTGGAACTTTTTTAACACCTTCGCTGATGACTGTAGAGGTGTGACCAAGATATCAAGGAAACCAGACTTCCGTCGCGAATCGATTTTGATTTCAAAAGCGGTGCTTCGGTTGCCAGAAGGTGGACCCAAGGTGACGTTCCATGCCGATGCTCCCATACGCGAGCGAGTCTTCAGCTTCAGTCGGGAAGCCATTCTCGAGCTGAAAGCAAAAACCAACAACATCAGATGGACTATGAACGATGATGCACATGAGTTACAGAAGAAGCAAAGCAACGACACTTATCAGATTCACAGCAACGGCAAAGTGATGTCGCTTTTAAACAACTGGCTCAAGAGCGCCGTCCCAAAACCACAAGCGGTGGAAACGGTTGAGGAAATTTCGTCGTTCCAGTCTCTCTGCGCTCTAGTATGGCAGGCAGTCACACGTGCGAGGAACTTGGCTTCAAACCAAACGACAACGTTTAGAATGGCAGTGAACTGCCGTCACAGGCTGGAGCCAAAACTTGATCCTTACTACTTCGGCAACGCAATTCAGAGTATACCGACTTACGCTACAGCAGGTGACGTGATTTCGAATGATCTACGCTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCCCACGATGACACATCGATAAGGCGGTTCGTGGAGGATTGGGAAAGCCATCCGAGGTGTTTCCCGCTGGGAAACTCCGACGGTGCATCCATCACCATGGGTAGTTCGCACAGATTCCCCATGTATGAGAACGATTTTGGGTGGGGCAGACCTTTGGCCGTGAGGAGTGGTGGTGCCAACAAATTCGACGGTAAGATCTCGGCTTTTCCCGGGAGAGAAGGTGGAGGGAGCGTTGATTTGGAGATGATCCTGTCGCCCGAAACAATGTCGGTTTTGGAGTCGGATATGGAGTTCATGCATTACGTGTCAAGCTAA 1428 0.5049 MPSLSLVSKCSVFPDQKSTLGDLKLSVSDLPMLSCHYIQKGCLFTRPSLPLHSFSLLLKTSLSRTLSIFPPLAGRLKTDSSGYVYITCNDAGVEFVLASASGLYIRDILAPTHVPDCVKQFFVFDQTVSYAGHFQPILAVQVTELADGIFIGCTVNHAVVDGTSFWNFFNTFADDCRGVTKISRKPDFRRESILISKAVLRLPEGGPKVTFHADAPIRERVFSFSREAILELKAKTNNIRWTMNDDAHELQKKQSNDTYQIHSNGKVMSLLNNWLKSAVPKPQAVETVEEISSFQSLCALVWQAVTRARNLASNQTTTFRMAVNCRHRLEPKLDPYYFGNAIQSIPTYATAGDVISNDLRWCAEQLNKNVKAHDDTSIRRFVEDWESHPRCFPLGNSDGASITMGSSHRFPMYENDFGWGRPLAVRSGGANKFDGKISAFPGREGGGSVDLEMILSPETMSVLESDMEFMHYVSS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00780 475 Gene3D - 216 470 IPR023213 -
Pte18g00780 475 Pfam Transferase family 7 470 - -
Pte18g00780 475 Gene3D - 4 201 IPR023213 -
Pte18g00780 475 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00780 Pte-Chr18 19434728 19436991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00780 57 464 Monolignol Biosynthesis Gene Families AT5G48930 27.880 1.76e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00780 - - zju:107413810 715.301