Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00778 ATGGACGAGGGCATGACAGGCTTTTACTTAAAAGCAGGAGGTGGTGTTCGTGGTGGTAGCAATGGCAGTACTGGAACTGGTACTAAATGTGGTCGTTGGAATCCCACAGCTGAACAGGTTAAAGTTCTGACTGACTTGTTCAGGTCCGGACTCCGTACACCAAGCACTGATCAGATTCAAAAGATTTCAATGCAGCTGAGCTTTTATGGTAAGATTGAGAGCAAGAACGTATTTTATTGGTTTCAAAACCACAAAGCTAGAGAACGACAGAAGCGCCGCAAAGTCTCCTTTGATGAGAGAGACGTTCTTCGTCGAGAAAACAAGATCATTTCTTCTACACCTCATTTTGTAGAGACAACAGATTATAGCTGTGATGAGCATGAGAGGGCGATTGAGACTCTGCAACTTTTCCCCTTGAACTCCTTTGGTGAATATGAATCGGAGAAGAGAAGGATTCATACAGATGAGTACAAGGATAATTCAATATTTTCCTACAATAACATAGGGGAAGAGATTGAACACCCACCATTGGACCTGCGCTTAAGCTTTCTGTAA 555 0.4288 MDEGMTGFYLKAGGGVRGGSNGSTGTGTKCGRWNPTAEQVKVLTDLFRSGLRTPSTDQIQKISMQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDERDVLRRENKIISSTPHFVETTDYSCDEHERAIETLQLFPLNSFGEYESEKRRIHTDEYKDNSIFSYNNIGEEIEHPPLDLRLSFL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00778 184 SUPERFAMILY Homeodomain-like 31 94 IPR009057 -
Pte18g00778 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 18 109 IPR044555 GO:0003700|GO:0099402
Pte18g00778 184 SMART HOX_1 28 95 IPR001356 GO:0003677
Pte18g00778 184 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Pte18g00778 184 CDD homeodomain 32 92 IPR001356 GO:0003677
Pte18g00778 184 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Pte18g00778 184 Gene3D - 29 97 - -
Pte18g00778 184 FunFam WUSCHEL-related homeobox 11 29 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00778 Pte-Chr18 19428130 19428982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00778 13 185 Wox Gene Family AT3G11260 57.609 5.77e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte18g00778 Homeodomain 2.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00778 - - qsa:O6P43_020247 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00778 18 19428130 19428982 Pte18g00778 18 19428130 19428982 RCT