Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00772 ATGGCCACAGCTGCCGCCACCTTCTCGAACTTCTTTGGCACCCAAATTCGCAGCAGCAGCAACAACTCAGGATCCGGAAGAATTCGCATGCTCTTTGGTTTGAAGAAAGCAGCGCCACCAAAGAAAGCGGCCCCTCCAAAACCTGCAGAAGACCGACTTGTGTGGTTCCCTGGTGCACAGCCACCTGAGTGGCTCGATGGAACTTTGGTGGGTGATCGTGGTTTTGACCCATTTGGGTTTGGAAAGCCAGCAGAGTATTTGCAATTCGACTATGACGGATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATCGGAACAAGGGTGGAGACCGCTCAGGTGCAACCCACTCCGTTGCAGCCCTACACTGAGGTCTTTGGTTTGCAAAGGTTTAGAGAATGTGAGGTGATTCATGGAAGGTGGGCAATGTTGGGTGTTCTTGGTGCCTTGTCTGTTGAGGCACTCACCGGTGTTGCATGGCAGGATGCCGGAAAGGTAGAATTGGTGGAAGGTTCATCTTATCTGGGGCAACCACTTCCATTCTCCATAAGCACATTGATATGGATTGAAGTGATTGTGATAGGCTACATTGAATTCCAAAGGAATGCAGAACTTGATCCAGAGAAAAGGCTGTATCCAGGAGGGCAGTTCTTTGATCCTCTTGGTTTGGCTGCTGACCCTGAAGAAAAGGTCAGGCTGCAACTGGCAGAAATCAAGCATGCCCGACTTGCTATGGTGGCCTTCCTCATCTTTGCAATTCAGGCCGCTGCAACTGGAAAAGGACCCATCGGTTTCGTGGCTACTTTTAATAACTGA 822 0.5012 MATAAATFSNFFGTQIRSSSNNSGSGRIRMLFGLKKAAPPKKAAPPKPAEDRLVWFPGAQPPEWLDGTLVGDRGFDPFGFGKPAEYLQFDYDGLDQNLAKNVAGDVIGTRVETAQVQPTPLQPYTEVFGLQRFRECEVIHGRWAMLGVLGALSVEALTGVAWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGQFFDPLGLAADPEEKVRLQLAEIKHARLAMVAFLIFAIQAAATGKGPIGFVATFNN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00772 273 SUPERFAMILY Chlorophyll a-b binding protein 49 270 - -
Pte18g00772 273 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Pte18g00772 273 Gene3D Chlorophyll a/b binding protein domain 54 273 - -
Pte18g00772 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 269 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00772 Pte-Chr18 19357309 19359435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00772 12 270 Chloroplast and Mitochondria Gene Families AT3G08940 72.692 3.15e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00772 K08915 - qsa:O6P43_020206 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00772 18 19357309 19359435 Pte18g00772 18 19357309 19359435 RCT