Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00770 ATGGAGTTCTGTGTTACAGTACTGTTCTGTTCATGTGTTATACTCTCCGCGTTACTTGTTCTCCTTCTCCTCCTCCGTAGCTACCGGTTGGGAAGGTCCCACTTGCCACCGGGAACCTATGGGCTACCTTTGATCGGTGAAACCTTGCAACTCATCTCGGCCTACAAGTCTGACAATCCAGAACCATTCGTCGACAGCCGTGTCAGTCGCTACGGTCCAATATTCACCACCCATATATTTGGTGAACCCACGGTTTTCTCAGCCGACCCCGATCTAAACCGGTTCATCATGTCGAACGAAGGGAAGCTCTTCGACTGCAGCTACCCAGGTTCGATATCCAACTTGCTGGGTAAGCACTCTTTGTTGCTCATGAAAGGCAGTCTTCATAAAAGAATGCACTCACTTACCATGAGTTTTGCAAATTCCACTATTATCCGTGAACATTTGCTTCTTGATATCGACCGGTTGATCCGCCTCAACTTGAATTCCTGGACCGACAGGGTTTTGCTCATGGAGGAGGCCAAGAAGATAACATTTGAGTTGACAATGAAGCAGTTGATGAGTTTTGATCCATGTGAATGGACTGAGCGTCTAAAGAATGAGTACGTGCTTTTAATTGAAGGGTTCTTCAGCGTCCCCATACCTATCTTCTCCACCACATATCGCAGGGCCATTATGGCAAGAACAAGGGTGGCAGAAGAATTGTCTTGGGTGGTGAGACAAAGAAGGACCTCGTGTGAAGCAGGAGAGAGAAAGAATGACATGCTGGGGGCACTGTTGGCAGGAGGTGACCACTTCTCCGACGAGCAAATAGTAGATTTTCTGTTGGCTTTGCTCGTTGCCGGATATGAAACCACTTCGACCATAATGACTCTTGCCGTTAAGTTTCTCACTGATACACCTCTTGCTTTGGCACAGATCAAGGAAGAGCATGATCAAATTAGAGCAAACAAGAATGATCCTGAGGCACTCGTGGAATGGAACGATTACAAGTCAATGAAATTCACTCAATGCGTTGTGAACGAGACTCTACGCATGGCAAACATAATAGGTGGGATATTTAGGAGAACTATGACAGACATAAGCATAAAAGGTTACACAATTCCTAAGGGGTGGAAGGTCTTCGCGTCATTTCGTGCTGTTCATTTGAATCCAGATCACTATAAGGATGCTCGTACTTTTGATCCTTGGAGGTGGCAGAACAACTCAGAAGCTGCAGGAAGTGGGAATGTATATACACCGTTTGGAGGGGGGCCAAGGCTGTGCCCTGGTTACGAGCTTGCTAGAGTAGTACTTTCTGTGTTTCTTCATCGCCTAGTCACCCGCTTCAGTTGGGTTCCAGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACCACTCGAACACAGAAGCGATATCCAATCATTGTACGAGAGAGAAATCTCTCTAAAAGCCATGTAAGAACAGGTTAA 1449 0.4631 MEFCVTVLFCSCVILSALLVLLLLLRSYRLGRSHLPPGTYGLPLIGETLQLISAYKSDNPEPFVDSRVSRYGPIFTTHIFGEPTVFSADPDLNRFIMSNEGKLFDCSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSTIIREHLLLDIDRLIRLNLNSWTDRVLLMEEAKKITFELTMKQLMSFDPCEWTERLKNEYVLLIEGFFSVPIPIFSTTYRRAIMARTRVAEELSWVVRQRRTSCEAGERKNDMLGALLAGGDHFSDEQIVDFLLALLVAGYETTSTIMTLAVKFLTDTPLALAQIKEEHDQIRANKNDPEALVEWNDYKSMKFTQCVVNETLRMANIIGGIFRRTMTDISIKGYTIPKGWKVFASFRAVHLNPDHYKDARTFDPWRWQNNSEAAGSGNVYTPFGGGPRLCPGYELARVVLSVFLHRLVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVRERNLSKSHVRTG* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00770 482 CDD CYP90-like 67 469 - -
Pte18g00770 482 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 Pfam Cytochrome P450 211 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PANTHER CYTOCHROME P450 26 33 446 - -
Pte18g00770 482 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 382 400 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 422 440 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 272 298 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 PRINTS E-class P450 group IV signature 406 422 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 SUPERFAMILY Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g00770 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Pte18g00770 482 FunFam Cytochrome P450 90A1 25 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00770 Pte-Chr18 19343322 19347396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00770 124 475 Cytochrome P450 AT5G05690 76.771 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00770 K09588 - gmx:100775886 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00770 18 19343322 19347396 Pte18g00770 18 19343322 19347396 RCT