Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00756 ATGCCTTCAAGTGTTGTACATTGGTTTAGCTTTGTGGCAATCATATGGCTCCAAGCAATAAGTGGCACAAACACCGTCTTCCCTGCTTATGCATCCCAAATGAAGGAACTCCTCTCTATTTCTGAGCTGAAACTTAACATTCTTCCCTTTGCATCTGATGCAGGAAAACTATTTTCTTGGTTTTCTGGAGTTGCTACTGTGTATCTACCCCTTTGGGTTGTTCTTCTAATCGGTTCAACCCTTGGTTTCATTGGCTATGGTGCGCAGTACCTTTTTGTAACAGGAAAGATTGAATCTTTATCATACTGGCAAGTTTTCTTACTCACCGTTCTCTCAGGGAATAGCATTTGTTGGCTCAATACAGTTTGCTATGTTATTGCAGTAAGGAACTTGCTGTTTGATCGTCAAGTCGCTGTTGGCTTGACAACAAGTTACCAAGGATTATCTGCAAGGATATACGTAGATATAGTGCAATCCATTTCTCCACGCCGAAAGGCTCCAGCTTTCCTCCTCCTAAATTCAATCATACCAGTTATTGCTTCTCTCCTAGCTGCACCATTTATTGCAAACATTGAAGTTGGAACGCCTAGAATTATTGAGATACGAACCTATGTAATGTTTATCATTGCGATAACTACTGGAATCTACGTTGTGGTGAGCAGTATGCAGTTTCCATCATTTTTTGTATCTCCTCCAATTAGTCTCATCGGTATTGTGGTGTCTCTCCTCCTGCCTCTAGTGACTCCATTGGCTGAAATGATCATGGGAATCACAGGATACCGATACAGAAATAGAGACACCAATCTCAAGGTTGTCTACGAAGAGAGCTTTGAGAATGGTGTTATTGACAAATATTCCACAATAAGCAAGAATATTGCAGGAGATGCTGAAGATGATGAGATAACCCATGTTAAAGAGGAAATTGGTGTGAACTTAATGATCCGAAGAATTGATTTCTGGCTATATTTCTCTGCATATTTATTTGGCCCAACAATTGGTTTGGTGTTTATGAACAGCTTGGGACAGATAGCTGAGTCTCGTGGGGTTGCTACTGCATCTTTGGTTATCTTGTTTTCATCTATTGGGTTTTTTGGTCGCCTCTTGCCTGCATTTGTGTCCTATTGCTTCTCAAGGAATAAGAGCGTTATCTCAAGCCCAGGTTCAATGACTCTGTTCATGGCTCCTATATCTGGAGCTTTCTTCTTACTTGTCAGCAAATCAAACGTTGCATTGTACATTAGCACTGCCATTATAGGGTTATGTACAGGTTCAATCACCTCAATTGCTGTGTCAACTACTGCTGAGCTGTTTGGGATGGAGAACTTCCCAGTTAATCACAACGTGGTAGTTGCCAATATTCCTCTAGGTTCATTTTCACTTGGGTTAATGGCTGCTCTTCTTTACAATAGGGAAGCCGATGAACATGGGATTTGCTTAGGAAGGGGATGCTACAATCATACTTTTCTTATTTGGGGTTGTTCAGGTATCATGGGGACTCTGCTAACTCTGATTCTATATTTTCGTACAAGAAAATTTTACTCATACGTGAGGTAA 1554 0.408 MPSSVVHWFSFVAIIWLQAISGTNTVFPAYASQMKELLSISELKLNILPFASDAGKLFSWFSGVATVYLPLWVVLLIGSTLGFIGYGAQYLFVTGKIESLSYWQVFLLTVLSGNSICWLNTVCYVIAVRNLLFDRQVAVGLTTSYQGLSARIYVDIVQSISPRRKAPAFLLLNSIIPVIASLLAAPFIANIEVGTPRIIEIRTYVMFIIAITTGIYVVVSSMQFPSFFVSPPISLIGIVVSLLLPLVTPLAEMIMGITGYRYRNRDTNLKVVYEESFENGVIDKYSTISKNIAGDAEDDEITHVKEEIGVNLMIRRIDFWLYFSAYLFGPTIGLVFMNSLGQIAESRGVATASLVILFSSIGFFGRLLPAFVSYCFSRNKSVISSPGSMTLFMAPISGAFFLLVSKSNVALYISTAIIGLCTGSITSIAVSTTAELFGMENFPVNHNVVVANIPLGSFSLGLMAALLYNREADEHGICLGRGCYNHTFLIWGCSGIMGTLLTLILYFRTRKFYSYVR* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00756 517 SUPERFAMILY MFS general substrate transporter 6 511 IPR036259 -
Pte18g00756 517 Pfam Nodulin-like 7 249 IPR010658 -
Pte18g00756 517 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00756 Pte-Chr18 19162036 19163689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00756 1 514 Nodulin-like Gene Family AT2G30300 45.574 2.24e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00756 - - gmx:100793370 576.63