Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00751 ATGAGAGGACGTGAGCCTCGTTCAAGCTCTTCCTGTGCAGCATGCAAGCTCTTGAAAAGAAGATGCACACCGATCTGTATATTTGCACCACACTTCCGGTCTGATGAGCCCAAGAAATTTGCCAAGGTTCACAAGGTCTTTGGAGCAAGCAATGTCAGCAAAATCCTGATTGAAGTGCCAGAGGAGCAACGTGAAGACACTGTAAATTCGCTGGCCTATGAGGCTGAAGCAAGGCTTAGAGACCCTGTCTATGGATGCATTGGTGCTATAACTTTGTTGCAAAGGAAGATGGTGGAACTTGAACATGATCTGGCTATTGCTAGAGCTCGTCTAGCTCGGTACACCCTTCCCTCCGCTGCTGCTACTTCTGCAGCACTCTTATATGACCAACTTAGCTGGGCACCGGTCCCCGACCTATATGCTTGCAATGACTTGAGCGAAAGTAGTTTCAGCCAGTATTCATCTGAACTGCTCCATCCACATGAAGTGGCAAGTGACTTTATCCAAATCCCACATATCTTTTAA 525 0.4724 MRGREPRSSSSCAACKLLKRRCTPICIFAPHFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAITLLQRKMVELEHDLAIARARLARYTLPSAAATSAALLYDQLSWAPVPDLYACNDLSESSFSQYSSELLHPHEVASDFIQIPHIF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00751 174 Coils Coil 90 110 - -
Pte18g00751 174 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Pte18g00751 174 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Pte18g00751 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00751 Pte-Chr18 19148472 19148996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00751 1 111 AS2 family AT3G11090 81.081 8.27e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g00751 LOB 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00751 - - qlo:115957522 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g00751 18 19148472 19148996 Pte18g00751 18 19148472 19148996 RCT