Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00749 ATGGGTGGATCAGCTCACTATGTAGAGAACATGGAGTCCGTTAATATAGCTGGAGGGAGAAAGAATTTCGTGGCTGACTCAGACAACGAGTCAGGAGGCGCATATGGGGTGGTTTGTGGTAGCTGCAATGAATTTCCAGGAAATAGAGAACAGGATATGTATCTTCCTATAGCAAACGTGAGTAGGATCATGAAGAAAGCATTACCAACTAAAGATTTCATCAGTTTCATTACCGGGGAGGCATCTGATAAGTGCCAAAAGGAGAAAAGGAAGACAATCAACGGGGATGATATTCTGTGTGCCATGACTACACTGGGTTTTGATGACTATGTGGAGCCTCTGAAGGTTTATCTGCAGAAGTATAGGGAGATGGAAGGGGAGAGGACTACCTTGACCGATAGGCAACAAGGTGATCAGAGAGATCATGGTGCTAATGGTGGTGAAAGTACTAGCACGAGTGGTCTTAGCAGTGGATTTTCAGGAGGTTTTAAAAGAAGCACAAGTAGAGGTTATGCTGCCATTTATGGATAA 531 0.4407 MGGSAHYVENMESVNIAGGRKNFVADSDNESGGAYGVVCGSCNEFPGNREQDMYLPIANVSRIMKKALPTKDFISFITGEASDKCQKEKRKTINGDDILCAMTTLGFDDYVEPLKVYLQKYREMEGERTTLTDRQQGDQRDHGANGGESTSTSGLSSGFSGGFKRSTSRGYAAIYG* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00749 176 MobiDBLite consensus disorder prediction 142 161 - -
Pte18g00749 176 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 71 102 IPR003958 -
Pte18g00749 176 MobiDBLite consensus disorder prediction 127 161 - -
Pte18g00749 176 Gene3D Histone, subunit A 44 153 IPR009072 GO:0046982
Pte18g00749 176 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 47 71 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte18g00749 176 PRINTS CCAAT-binding transcription factor subunit A signature 104 122 - -
Pte18g00749 176 PRINTS CCAAT-binding transcription factor subunit A signature 85 103 - -
Pte18g00749 176 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Pte18g00749 176 MobiDBLite consensus disorder prediction 127 141 - -
Pte18g00749 176 SUPERFAMILY Histone-fold 51 140 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00749 Pte-Chr18 19118258 19120064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00749 24 135 CCAAT-HAP3 Transcription Factor Family AT4G14540 64.062 1.16e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte18g00749 CBFD_NFYB_HMF 1.9e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00749 K08065 - gmx:100778034 161.384